Struthio camelus australis (South African ostrich): 104153168
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Entry
104153168 CDS
T08512
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104153168 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104153168 (HBS1L)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104153168 (HBS1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
104153168
NCBI-ProteinID:
XP_009687224
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
LYFLDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPAFAEPLEEEYGYEGTEDTAGYF
TTNHQLAGVDKARLNSCLDQMREVLGESVPERTMVQAVLDSQFDVQKALDLVLSQDSKQN
MKTKNEDAVIIGKMTKGDLLYCPEIFINTDNVSCASENVADNTNTSRLGNLRAKSGYSLV
TNDKMLLNAKTSNIPLSEKKKLKSSSLVLSSSFCDGLVKGSLYEPLNKQAEFQLPESANA
VSLILDSENAYFSIGSNKSGSSSFKKPERKETQDLKSLLMQNVICESLSLDDSMPFVSSS
TSDCDSNANSHSPPCLTSALGKLALDNEVSHTVSRKNELLENFSSLVQGRKQESPSLEMA
ALPVSKSGSTSLADLLQEHQGSSASRCYSLADLYTQSTASLPDVKLGTSQLVSQPQTSGA
MPELTGSLSSLALSKVSPVKEVENLSLSDLIAETIEVDKTQHGNDFSMLSATEMRPSKRT
NIDLSGIMKKADVSAEQNVVGQSNTLIPETKLLNVKQGKCSIFAKTNKKPKRGLIPKRHD
LSLSWMKALRARPSPFALTLCLRYPPKGYKRRTVAMHKTFLYSRQVQEVKPKEIGPVIAI
TPFDFKSASPDDIVKANQKRAFTRDHNLKFKLAFCLLLGKSRDSQSARMESEIVPKVTKM
TVSGKKQSMGFEVPCGITEENGHVNTSQKVLLTEDASVTSGVPETASKSALSPQVVQVSE
EQNVVPTPVKKSSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGN
VNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAP
GHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN
KMDQVNWQQERFQEIIGKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSDELAKWYK
GKCLLEQIDSFKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPN
ETCTAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVGSVFCDPKEPIKVCTRFRARIL
IFNIEVPITKGFPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQ
TQRPVALELYKDFKELGRFMLRYGGSTIAAGVITEIKE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
ctctacttcttagattttgaagatgatgatgtgtatggccaatcagtagaagatgattac
tgcatttctccgtcaacagcagctcaatttatctactcaagacgagacaaaccagcattt
gctgagcctttagaagaggaatatggctatgagggtacagaagatactgctggttacttt
acaaccaatcatcagttggctggagttgataaagcccgtcttaattcatgccttgatcaa
atgagagaagttttgggagagtccgtaccagagcgaacaatggtgcaagccgtactggat
agtcaatttgatgtacagaaggctttggatcttgtgctctcacaagacagtaagcaaaat
atgaagaccaagaatgaggacgccgtgattataggaaagatgacaaaaggagacttactt
tattgtccagaaatatttattaatacagacaatgtctcttgtgcatcagaaaatgttgct
gacaacaccaacacatctaggcttggaaacctgagagccaaaagtggttactctttagtt
acaaatgacaaaatgctccttaatgctaaaacatccaatatacctttatctgaaaagaaa
aaattgaaatcctcttcacttgttctgtcatcttctttctgtgatggtttggttaaagga
tcattatatgaacctctgaataaacaggcagagtttcaactaccagaaagtgctaacgca
gtaagtttgattcttgacagtgaaaacgcttactttagtataggaagtaacaaatctgga
agttcttcttttaagaagccagaacgcaaggaaacacaggacttaaaatccttgctgatg
cagaatgtgatttgtgagtctctgagtcttgacgacagcatgccttttgtttcttcaagt
acttctgactgtgatagtaatgcaaattctcatagtcctccttgtttaacgagtgcttta
ggaaaattggctcttgataatgaagtcagtcatactgtaagtagaaagaatgaacttctt
gaaaatttttcttcacttgtacaaggtagaaaacaagaaagcccctctttagagatggct
gctttgccggtgtcaaagtctggaagtacatcactggcagacttgcttcaggagcatcag
ggaagcagtgcaagtcgatgttattctttggctgatctttatactcagtcaacagcaagt
cttccagatgtgaaattgggaacctcacaactagtaagtcaacctcagacttcaggtgcg
atgccagagctaacaggatctttgtcttctctggccctctccaaagtttctccagtaaag
gaagttgagaatttgtcactgtcagatttaattgcagagactattgaagtagataaaact
caacacggaaacgacttctccatgctcagtgcaactgagatgaggccctctaaaagaaca
aacattgacttaagtggtattatgaaaaaagcagatgtatcagcagaacaaaatgtagta
ggacaatcaaacaccttaatcccagaaactaaacttttaaatgtgaagcaagggaaatgt
tctatttttgctaaaacaaataaaaaaccaaaaagagggcttattcccaagaggcatgat
ttatccctttcgtggatgaaggcactgcgtgcaagaccttcaccttttgctttaaccttg
tgtctccgttatcctccgaaaggttacaagcggcgcacggttgctatgcataaaactttc
ttatacagtagacaagtgcaagaagtaaaacccaaggaaatcggtcctgtaatagccata
acaccgtttgacttcaaatcagcatctcctgatgatattgtgaaagctaaccaaaaaaga
gcctttacaagagatcacaaccttaagttcaaactcgctttttgtctattactaggaaaa
tcaagggattcccagtcagccagaatggaatctgaaattgtgccaaaagttaccaaaatg
acagtgtctgggaagaaacaatctatgggatttgaagttccatgtggtattactgaagaa
aatggccacgttaacacatctcagaaagtactgttaactgaagatgccagtgtaacttct
ggggtacctgagacagcctcaaaatctgctctttcaccccaagtagtgcaagtttcagaa
gagcaaaatgtggtgcctactccagtgaaaaagtcaagcaagacaaaaccacagatagat
gtgaaagcagagctggagaagcgacaaggaggaaagcaactgcttaatttggtggtaata
ggacatgttgatgcaggtaaaagtactttaatgggtcatctgctctaccttttgggaaat
gtgaacaaaagaactatgcacaagtatgagcaggaatctaagaaggctggcaaagcttca
tttgcctatgcatgggtcttggatgaaactggggaagagagagaaaggggagtaacaatg
gatgtgggtatgaccaaatttgagacaaagactaaagtaattacgttgatggatgctcca
ggccataaagacttcattccaaatatgatcacaggagctgcacaggctgatgtggctatt
ttggttgtggatgctagcagaggagagtttgaagcagggtttgagactggtggacaaact
cgagaacatggattattagtgcgttctcttggagtgacacagctagctgttgcagtcaat
aaaatggaccaggtcaattggcaacaggaaagatttcaggaaattattggcaaacttggc
caatttcttaagcaagctggctttaaggagtctgatgtggcttatatcccaacgagtggt
cttggtggagaaaatctagtcacaaggggtcagtcagatgaactcgctaagtggtataaa
ggaaagtgtttgttagagcaaattgattctttcaagccaccacaaagatcagtggataaa
ccatttaggttgtgtgtcgctgatgtttttaaagaccaaggatcaggattttgtgtgact
ggtaaaatagaagcaggctatattcaggttggtgaacgacttctggcaatgcctcccaat
gaaacttgcactgcaaaaggaattacactgcatgatgaaccagttgattgggctgcagca
ggagatcacgttagtctcactttgaccggcatggatatcatcaaaatcaatgttggctct
gtattttgtgatcccaaggaacccattaaagtttgtactcgtttcagagctcggattctc
atctttaatattgaagttccaattactaaaggatttcctgtgcttttacactatcaaacc
gtaagtgaacctgctactatcagaagattattgagcatcctgcacaaaagcactggtgaa
gtgacaaagaaaaaacctaaggttctgactaaaggacagaatgctttaatagaactacaa
actcaaagacctgtagctctagagttgtataaagattttaaagagcttggaaggtttatg
ttacgctatggtggttccactattgctgcaggagttatcacagagattaaagaatga
DBGET
integrated database retrieval system
