Struthio camelus australis (South African ostrich): 104153266
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Entry
104153266 CDS
T08512
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104153266 (PDZRN3)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104153266 (PDZRN3)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104153266 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
Prok-RING_4
Tricorn_PDZ
zf-rbx1
U-box
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104153266
NCBI-ProteinID:
XP_009687369
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
DVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRISTKELNHVLPL
KSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQGEETKALTLVLH
RDSGSLGFNIIGGRPCVDNQDGLSSEGIFVSKIVDTGPAAKEGGLQIHDRIIEVNGKDLS
KATHEQAVEAFKTAKEPIVVQVLRRTPRTKIFTPSHESQLVDVGTQTDITFEHIMALSKM
GSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEVDLHRVNSQDKL
GLTVCYRTDDEDDIGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEAVALLTSE
DSKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASMLQQKKHEED
GGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTLGSQKKLTYSHD
TLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSANPYNLYYQNSTL
DMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYREPWMLHNSGFRNYNT
SIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRTAEGINCQGN
EGAVAHNASQKNLFPSSESHESSVGKCHSSPKDPDLSKQLESKDRKASDGNKSPTHGQKA
SGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDFNSSQSE
PRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKE
ERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDN
WMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gacgtggatcccgacttcaagtgcaatctgtgcaacaaagttttggaggacccgctcacc
accccttgcggccatgtgttctgcgccggctgcgtcctgccctgggtggtgcagcagggc
agctgcccggtgaactgccagcggatctccaccaaggagctcaaccacgtcctgcccttg
aagagcctcatcctcaagctggacatcaagtgcgacaaccacgcgcggggctgcgaggcg
gtggtgccgctgcagcacctgggcgagcacgccgagacctgcgacttctcgccggccaag
tgccgcaaccgcggctgccgccagggtgaagaaactaaagcactgactcttgtccttcat
cgtgactctggctctcttggatttaatattattggtggccgaccatgcgtggacaatcag
gatggtttgtctagtgaaggaatttttgtatcgaaaatagttgacactgggcctgctgct
aaggaaggagggctacaaattcatgacaggattattgaggtcaatgggaaggatttatct
aaagcaacacacgagcaggcagtcgaagcattcaaaacagccaaggagcccattgtggtg
caggtcctgagaagaactccacgcaccaagatcttcactccttctcatgagtctcagctg
gtagatgtgggcacacagacagacatcacttttgagcacatcatggctctaagcaagatg
ggctcgcctactccacctgtctcagtgctagacccatacctactacctgaagatcatcca
tcagtgcatgaatactacgacccaaatgactacatgggaggaattcatcaagaaatggac
cgagatgagttagaattagaggaagtagatttacatagagtgaacagccaggacaagctt
ggccttactgtatgttacagaacggatgatgaagatgacattggtatttacgtgagtgag
attgaccccaacagtattgctgcaaaagatggtcgactccgagagggggatcgcattatt
caaattaatggcatagaggtacagaacagagaagaagctgtggcccttctcaccagcgaa
gacagcaagaatatctccttacttgttgcaagaccagaaattcagctggatgaaggatgg
atggatgatgatagaaatgattttctggatgacttgcacatggacatgttagaggaacag
caccaccaggcaatgcaatttactgccagcatgcttcagcagaagaagcatgaggaagat
ggaggtaccacagatacagctactattttatctaaccagcacgagaaggacagtggcgta
gggcgcacggatgacagcactcggaatgatgaaagctcagaacaggaaaacaacgcagat
gatcacaccacttcctctaacactttagggagccagaagaagctgacatacagccatgac
accctaggaagtggtgatatgcagttcagcaatgagtcgttcatctcagccgactgcaca
gacgttgacttccttggaatccctgtagacgaatgcgagcggttccgggaactgctggaa
ctgaagtgccaagtgaagtctgccaacccttacaatctgtattatcagaacagcactctg
gatatgagcaaaagcgaccaagagagcgttgacagagagttggagatgctgaatgaggag
ctgcgcaatatcgagctcgagtgcctgaatattgtgagagcccataaaatgcagcagctg
aaggagcagtaccgggagccttggatgctacataacagtgggttccgcaactataataca
agcatcgatgttcgcaggcacgagctctcagatatcacagagctccccgagaagtctgac
aaggatagctcaagcgcatataacacaggagaaagctgccgaagcacaccactcacactg
gagatttcccctgacaattcactgcgcagaactgcagaaggcattaactgtcaagggaat
gagggggcagtggcacataatgcctcccaaaagaatttatttcctagctcagagagtcat
gaatccagtgtgggtaaatgccattcctctcctaaagatcctgacctcagcaagcagctg
gaaagcaaagacagaaaagccagtgatggaaacaaaagcccgactcatggtcaaaaagct
tctggctcctatgtctccccataccatcactctccgtataagcatgctcacatccctgcc
cacgcacagcactatcagagctacatgcagctgatccaacagaagtcagctgtggaatat
gcacagagccaaatgagcctggtgagcatgtgcaaagactttaactcaagccagagcgaa
ccaaggatggaatggaaagtcaaggtcagaagtgatgggacccgctacattacaaagagg
ccagtcagggacaggttgctgagagaacgtgccataaagattaaggaggagcgcagcggt
atgacaacggatgatgatgccataagtgaaatgaagatgggccgttactggagtaaggaa
gagcggaagcagcatttagtgaaagcaaaggagcagaggagaaggcgtgagtttatgatg
cagagcaggttagattgtttaaaggaacagcaaggtgcagaagaaaagaaagagatgaat
atcattgaactgagccacaaaaaaatgatgaagaaaagaaataaaaaaatatttgacaat
tggatgacaatccaagaactgttaacccatggaacaaagtcaccagacggcacacgagtg
tacaattctttcctgtcagtgactactgtataa
DBGET
integrated database retrieval system
