Struthio camelus australis (South African ostrich): 104153315
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Entry
104153315 CDS
T08512
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104153315 (DDX43)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104153315 (DDX43)
Spliceosome [BR:
scam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104153315 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
104153315
NCBI-ProteinID:
XP_009687459
Ensembl:
ENSSCUG00000015925
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDVFGAFLSSYMKPPAGLSINLHLGSVKEQEMRRMCIFLTGRGGAKIRELEESSGARIQV
IKRICEAEVKIFGSITVQNKAKMLIEDTVTRLGQNYAREKHLDLIKPESTLQKSVINWAS
IRENKARYEAMKWADLPPIEKNFYKESSRTASMSQEEVELWRKENNNIICNDLKEGEKRC
IPNPVCKFEDVFEHYPDVMANIRKVGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA
YLMPGFIHLDSQPIPRDQRRGPGMLVLAPTRELALQVEAECSKYTYKGIKSICIYGGGDR
KGQINVVTKGVDIVIATPGRLNDLQMNSFINLKSITYLVLDEADRMLDMGFEPQIMKILI
DVRPDRQTVMTSATWPDGVRRLAKSYLKNPMIVYVGTLDLAAVNTVEQRVVVIPEEEKRA
FTRYFIDSMKPKDKVIIFVGKKLTADDLASDFGLQGIPVQSLHGNREQCDREQALDDFKK
GKVRILIATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGEAVTLVTKND
WRVASELIDILERANQAVPSELISMAERYKQFQLKKEMERDVRRPQRRPPKGL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttggtgcctttctttcctcttatatgaagcctcctgctggcctaagcata
aacctgcatttaggctcagtgaaggagcaagagatgaggcgcatgtgtatctttctaaca
ggtcgaggtggagctaaaataagagaacttgaggagtcttcaggtgctaggatacaggtt
ataaagagaatctgtgaagctgaagtaaagatttttggcagcattactgtgcaaaacaaa
gccaagatgttgattgaagatactgttacaagacttgggcaaaactacgctagagaaaaa
cacttggatcttatcaagcctgaaagtaccctgcagaaatccgtgattaactgggcctcc
attcgagaaaataaagctagatatgaagctatgaagtgggcagacttgcctccaattgag
aaaaacttttataaagagtcatcaaggactgcatctatgtcacaagaagaagtggaactg
tggcggaaagaaaataataatataatttgtaatgacttgaaagaaggtgaaaagcgctgc
attcccaatcctgtttgtaaatttgaagatgtgtttgagcattatcctgatgttatggct
aatatcagaaaagtgggttttcaaaaacctacaccaattcagtcccaggcatggccaatc
atactccaaggaattgatcttattggcatagcacagacgggtactgggaagacattagcc
tacttaatgcctggattcattcatttggattcacaaccaatacccagagatcagcgtcgg
gggccggggatgttagtccttgctcccactcgagaactggcgcttcaagttgaggctgag
tgttcaaagtacacatacaaaggaattaaaagtatttgcatatatggtggaggggaccga
aaaggacagataaacgtggttaccaaaggtgtggatattgttattgctactcctggcaga
ctgaatgatcttcaaatgaacagcttcataaatctgaagagcataacatatttggtttta
gatgaggctgacagaatgttggatatgggatttgaacctcagataatgaagatcctaata
gatgtgcggcctgacagacagaccgtgatgacgagtgctacttggcctgatggtgttcgt
cgcctagcaaaatcctatttgaaaaatcctatgattgtatatgttggcactcttgattta
gcagcagtaaacacggtagaacagagagttgttgtcatcccagaagaagaaaagagagct
ttcacacgatacttcattgactctatgaagccaaaagataaggtcatcattttcgtcgga
aagaaacttacagccgatgacttagcaagtgactttggtctccaaggaattccagttcag
tcgcttcatggtaacagagagcagtgtgatcgagaacaggctttagatgacttcaagaaa
ggcaaggtcagaatactgatagctactgacttagcatcccgtggtcttgatgtgcatgat
atcactcacgtttttaactttgacttccctcgaaacattgaagaatatgttcatagagta
ggtcgcactggacgagcgggacgtactggggaggcagtaacgcttgtcactaagaacgat
tggagagttgcgtctgagctgattgacattctggaaagagcaaaccaagcagttcctagt
gagcttatttcaatggcagaaagatacaaacaatttcagctcaaaaaagaaatggaaagg
gatgtgagaagacctcagagacggcctccaaaaggattgtaa
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