Struthio camelus australis (South African ostrich): 104153335
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Entry
104153335 CDS
T08512
Symbol
CNTN1
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1
KO
K06759
contactin 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104153335 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104153335 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scam00537
]
104153335 (CNTN1)
Cell adhesion molecules [BR:
scam04515
]
Immunoglobulin superfamily
Contactins
104153335 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scam00537
]
Others
104153335 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Interfer-bind
DUF4998
Tissue_fac
Ig_ILCR1
NDNF
Motif
Other DBs
NCBI-GeneID:
104153335
NCBI-ProteinID:
XP_009687484
Ensembl:
ENSSCUG00000016180
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGLLISHLVALCFIFCLAEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRARAIPFPT
YRWKLNNWDIDLTKERYSMVGGRLVINNPEKSKDAGKYVCIVSNIFGTVRSSEATLSFGY
LDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNG
NLYIANVEASDKGNYSCFVSSPSIAKSVFSKFIPLIPQSDRAKVYPADIKVKFKDTYALL
GQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENY
KGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGASFRKGE
LRIQSLTFEDAGMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIE
CKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINITKLDEGRYTCFAENNRGKANS
TGTLEMTEATRIILAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEH
YERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRVEEI
RDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMEAATVIDLIPWM
EYEFRIIATNTLGIGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYH
YGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPF
SLTAVIYSAQDAPTEIPTDVSVKVLSSSEISVSWHHVSEQSVEGYQIRYWAAHDKEAAAQ
RVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSRTIDIITRKAPPSQRPRIISSV
RSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLFSTGKHTIEVPVPSDGEYVVE
VRAHSEGGDGEVAQIKISGATVGVPPTLLGLLLPXPLVSLPTWSSECSPIYLVLNPRQRT
PFEHEDCNSF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcttaatcagtcatcttgttgcactgtgtttcatcttctgtctcgcagaggaa
ggaaataaaggttatggacctgtttttgaggaacagcccattgataccatctacccagaa
gaatcttcagatggacaagtttcaatgaactgcagggctcgagcgattccttttcctact
tacaggtggaaactcaacaactgggatattgatttaacaaaggaacgctacagtatggtg
ggaggcagactggtaatcaataatccagagaaatcgaaggatgctggaaaatatgtctgt
atagtatcgaatatctttggaactgtcagaagcagtgaagccactctgagttttggatac
ctggatccctttccacctgaggagcgctatgaggttaaagtgcgagaaggtgttggagca
gtgcttctgtgtgagcctccttaccattacccagatgatctcagttatcgctggcttcta
aatgagttcccagtattcatcgctttggacaaacgacgatttgtgtcacagacgaacggc
aatctctacattgctaatgtagaagcatcagataagggcaattattcatgttttgtgtca
agcccttcaatagcaaagagtgtattcagtaaattcattccacttattccgcaatcagat
cgtgcaaaagtatatcctgctgatatcaaggtgaagttcaaggacacctatgcactcctg
gggcaaaatgtgacgctggagtgttttgctcttggaaatccggttcctgaactcaggtgg
agtaaataccttgaacccatgccagccacggctgagataagcatgtctggtgcagttctt
aagatcttcaatattcagtatgaagatgaaggactttatgaatgtgaagctgaaaactat
aaaggaaaagataaacatcaggcaagagtttatgtgcaagcatctccagagtgggtggaa
catatcaatgatacggaaaaggatataggcagtgacctctactggccttgtgtagctaca
ggcaagcctattccaacaattagatggttgaaaaatggtgcctcattccggaaaggtgaa
ctaagaatacaaagtctgacctttgaagatgctggcatgtatcaatgtatagcagaaaac
acacatggcattatttatgcaaatgctgaactgaagattgtggcttcacctcctactttt
gaactgaaccctatgaagaagaaaatcctagcagctaaagggggccgtgtaataattgaa
tgcaagcctaaagctgctcctaagccaaaattctcatggagcaaaggaacagaattgctc
gtaaatgggagccgcatacatatttgggatgacgggagcctggaaattatcaacattaca
aagctggatgaaggtcgctacacatgttttgcagaaaataaccgaggaaaagctaatagc
actggtactctagaaatgacagaggctacaaggattattttagctccattgaatgttgat
gtcaccgttggagagaacgctaccatgcaatgcattgcatcccatgatcccacgttagac
ctcacatttatttggtctttaaatggctttgtaatagattttgagaaagagcacgaacat
tatgaaaggaatgttatgattaaatccaatggtgaactgctcattaaaaacgttcagctg
cggcatgctggaagatacacatgcactgcacagacaattgttgacaattcttcagcttca
gctgaccttgttgtaagaggtcctccaggccctcctggtggtataagagtagaagaaatt
agagacactgctgtagcacttacctggagtcgtggaacagacaatcacagccctatttct
aaatacactatccagtcaaaaacttttctgtctgaagagtggaaagatgctaaaacagag
ccatcagatattgaaggaaatatggaggctgctacagtgattgatttaattccatggatg
gaatatgaattccggataatagcaacaaacactttggggataggagaacctagtatgcca
tcacagagaattagaacagaaggcgctcctcctaatgtggctccttctgatgtaggagga
ggcgggggaagcaatcgagaactgacaataacgtggatgcccttgtcaagagaataccac
tatggcaataactttggttacatagtagctttcaagccatttggtgaaaaagaatggaga
agagttacagttactaatcctgaaattggccgatatgtccacaaggatgaatcaatgcca
ccttcaacccaatatcaagtaaaagtgaaagcttttaacaacaaaggggatggaccattc
agtctcactgctgtcatttattcagcacaagatgctccaactgaaatacctacagatgtg
agcgtaaaagttttatcatcttctgaaatctctgtttcttggcaccatgtttcagagcaa
tctgtggaaggatatcagattcgctactgggctgctcatgataaagaagctgctgcacag
cgggtacaagtgagcaatcaagaatattcaaccaaactggaaaacttgaagcctaataca
cggtatcatgtggatgtgtctgccttcaacagtgcaggctatggacctcccagtagaact
attgatattatcactagaaaagcacctccaagccaacgtccaagaattatcagttctgta
agatctggttcaagatacatcatcacctgggatcacgtgaaggcaatgtcaaatgagtct
gcagttgaaggctacaaagtgctgtatagaccagatgggcaacatgaaggcaagttgttt
tcaactggaaagcacacaatagaggtcccagtccccagtgatggtgaatatgttgttgag
gtccgagcacacagtgaaggaggagatggagaagtagctcaaataaaaatttcaggtgcc
accgttggagtcccgccgacgcttcttggcctgctgctgccgnnacccttggtgtccttg
cctacctggagttctgaatgtagcccaatttatcttgtcctcaacccaaggcaaaggact
cccttcgaacatgaggactgcaactctttctga
DBGET
integrated database retrieval system
