Struthio camelus australis (South African ostrich): 104153473
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Entry
104153473 CDS
T08512
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104153473 (COL25A1)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104153473 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104153473
NCBI-ProteinID:
XP_009687685
Ensembl:
ENSSCUG00000015582
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVP
GEPGKPGEQGLTGPQGPAGQKGSVGVPGVPGRDGQVGEPGLPGIAGEKGAAGLKGDPGER
GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG
FIGPQGEPGLPGLPGTKGDKGEAGPSGKGERGEPGTPGPKGKTGEPGSRGPKGSKGDTGG
KGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGPKG
EPGSPGTPGVDGEQGPKGSKGDTGEPGMPGEKGGIGLPGLPGASGMKGEKGDVGLPGAQG
PSIIGPPGPAGPHGPPGPMGPHGLPGPKGVDGPVGPHGPAGPKGERGEKGTVGDPGPRGP
YGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPD
GLPMPGCWQK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaacgc
cgcctcattaagggggaccaaggacaagctggaccccctgggcctccagggcctccagga
cccagaggtcccccaggagatactggcaaagacggtcctcgagggatgcctggcgtaccg
ggggagccaggaaaaccaggtgaacaaggattgacaggacctcaggggcctgcaggacaa
aagggttctgttggagtgcctggtgttccagggagagatgggcaagtgggtgaaccaggt
ttgcctggtatagcaggagagaagggagcagcagggcttaagggtgaccctggagagaga
ggagaaaagggtgatgctggagaaaatggacccaagggtgacacaggagaaaagggtgac
cctggttcttctgctgcaggaattaagggtgaacctggtgaatctggacggcctggacaa
aagggtgaaccaggtcttcctgggcttcctggactccctgggataaagggtgaaccaggt
ttcattggtccacaaggagaacctggattaccagggctaccaggaacaaagggtgacaaa
ggggaagcaggcccttctgggaagggagagcgaggtgaacctggtactcctggaccaaag
gggaaaacaggtgaacctggatctagaggcccaaaagggtcaaagggtgatacaggtggc
aaaggtgacacaggatctgcaggtccacggggaccacctggacagaagggtgatcaaggt
gcaacggagataattgattataatggcaatatccatgaagctctgcagaggattaccacc
ctaactgtcacgggtccaccaggaccaccaggaccccaaggactccaagggccaaagggt
gaaccaggatccccaggaactccaggagttgatggggaacagggtcctaaaggctcaaaa
ggggatacaggtgaacctggaatgcctggagaaaagggaggaattggactgcctggcttg
ccaggagccagtggtatgaaaggtgaaaaaggagatgttggtttgcctggtgcccaaggc
ccttcaatcataggaccacctggaccagcagggccacatggtcctccaggccctatggga
cctcatggactgcctggcccaaagggtgtagatggcccagttggtccacatggccctgca
ggtcctaaaggggagagaggtgaaaagggaactgtaggtgaccctggaccgagaggacca
tacggcttgcctggcaaagatggcgagcctggccttgatggcttccctggtcctcgagga
gaaaagggtgatataggagaaaagggagaaaagggattccgtggaattaagggggaaaaa
ggggagccaggccagcctggcctggatgggctggatgccccttgccaattgggtcctgat
ggattaccaatgcctggctgttggcaaaagtga
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