Struthio camelus australis (South African ostrich): 104153561
Help
Entry
104153561 CDS
T08512
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104153561 (TRPA1)
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104153561 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104153561
NCBI-ProteinID:
XP_009687800
Ensembl:
ENSSCUG00000015779
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAPSATGCWGTNSIRKGSERNKPSDGDLPASRQLLNRPDRRQHLAQEVLKPLTAVNRDTR
AKRQPIWFLVFFLSICPSCYLGARKRGGGRVTQRRAGEDALGREQMVISDGSACRLRSFI
KKNRSGLTKVDELNATPLHHAAEGGQIELMQMIIDDSSCEVLNVMDSSGNTPLHWATKKN
QIESVSLLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPI
IVACYKDNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAK
THINFTNNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVK
LMMSSYAGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLA
TSCASWKIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDE
DNEGCTPLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDM
KDTRLLNEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRT
MQIILDTNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILLNKAVASFFHEAIH
NRRKDVVSAVILHKRWEEAVLTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEK
TSRDFYIEYNFRYLQCPLMLNKKLKDDEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLL
MKWMAYGFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYEARPLEYEDSYFTRVC
MCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWE
CGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLG
SQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLM
NLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYC
GFMSVFQYCFGCEDSATDAQSTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEI
VSEAEDEDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNAPNPSTEKNNSFF
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcacctagcgccacaggatgctggggcacaaacagtataagaaagggctcagaaagg
aacaagccaagtgatggagacttgccagccagccggcagctattaaacaggccggaccgg
aggcaacatctggctcaggaagttcttaagccgctgacagccgtgaaccgcgacacacgg
gcaaaacgtcagcccatatggtttctggtcttcttcctgagcatctgccccagctgctac
ctcggggctcggaagcggggtggtggcagggtgacgcagcgtcgtgcgggcgaggacgcg
ctgggccgcgagcagatggtgatttcagatggaagtgcatgtagactgcggagcttcatt
aagaagaatcgttctgggcttaccaaagtggatgaattaaatgccaccccattgcatcac
gctgcagaaggtggtcaaatagaattaatgcagatgatcatagatgattcctcctgtgaa
gtattaaatgtgatggattcttctggaaatactccactacattgggccacaaagaaaaac
cagattgaaagtgttagtttacttctcagtagaggagccaacccaaatattctcaactcc
aatatgatggcacctttgcatatggctgtgcaatccctgcataatgaaattgttaagatt
ttagtccagcatagcagtacagatgttaatttggaaggcgaagcagggaacacacctata
attgtagcatgttacaaggacaatcctgaagcactgacactcctgattgaaaatggaggg
aaaatatgtaaaccaaacaaaacaggatgtatgcctatccatgcagctgcattttcagga
gcaaaaacatgtatggaaattctcttaaaaaaaggtgaagaattaggacactctgctaaa
actcacatcaattttaccaataatgggaagtgcagtccactccatttggcagttcaaagt
ggagacttggaaatgattaaaatgtgcattgaatttggagcccagattgatctaaaacag
aatgaaaaatgcacagcactacattttgctgccactcaaggagcaactgagattgtaaag
ttaatgatgtcgtcctatgctggtgaggaatctattattgatgctgtagatgggaataag
gaaacattgcttcacaggacagcattgtttgatcattatgaactggcagagtatttgatt
tcaatgggagcaaatattgatagtgttgacatagaaggtcgatccccgcttctgttggcc
acttcttgtgcatcatggaaaattgtgaatttactgctctcgaaaggagcaaatgtatca
ttaaaagatcatcttggtcggaatttcttgcatttgacggtattgcagcctggaggattg
caacatctgaatgagaaatttctgcagatggaacatattaaaaatcttgtagtggatgaa
gataatgaaggatgcactccattgcattatgcatgcagacaaggtgtggccctctctgta
aataacttactcagcctgaacgtttccatatattctaagagtagggacaagaaatcacca
ttacactttgctgccagctatgggcgcatcaatacatgtcagcgacttataagagatatg
aaagacacaagacttttgaatgaaggtgataagaagggaatgaccccacttcacctggca
gcacagaatggtcatgagaaggtagttcagtttcttctgaagagaggggcccttttcctc
tgtgattataaaggctggacagccctgcaccatgctgcctttggaggatacactcgcaca
atgcagataattttggatactaatgtgaaatgtactgacagagtggatgaagaagggaac
acagcattgcatttagctgcaagagaaggacacgcaaaagcagtaaggctacttcttgac
tatggtgcaaaaattctgttgaacaaagcagtagcttcttttttccatgaagcaatacac
aataggaggaaagatgtagtatctgctgtcattctgcacaaaagatgggaagaagctgtt
ttgaccttttctcactattctagtgctaataagtgtcctttgttggaaatggttgagtat
cttcctgattcatttaaactcgttttggataactgcataattgagtcttcagaagaaaag
acaagtcgagacttctatattgaatataacttcagatatctccagtgtcctctgatgctt
aacaagaagctaaaggatgatgaagacattttctatgagccacttaccactttaaatgcc
atggtacgccacaatcgcatggagctgctcagtcatcctgtatgtaaagaatatttgcta
atgaaatggatggcctatggttttcgagcacatctaatgaatttaggcatatattccctt
ggtctgatcccactgactctcctggtcacccacatacagccgggaagacctttgaatggc
acagaaatctatgaagcaagaccattagaatatgaggattcatatttcacaagggtgtgt
atgtgtttagttttaattatgagtttactgggaatctgcaaagaaatatttcagctcatt
cagcagaagttgaaatatttgttggattactccaatctgctggactggacaatttatact
acaagcataatttttgtatcttctttatttattaacacaccagctcatttgcaatgggaa
tgtggagcaattgctgtgtacttatcctggatgaacttcttgctttaccttcaacgattt
gaaaattatggcatctacgttgtgatgttctgggaaatcttgaggactttgattcggatt
gctgttgttttctttttcctgatactggcctttggacttagcttctttgtccttttgggt
tcacagcaaacatatagcacacctctgctttctgtaatgaagacatttgcgatgatgctg
ggagacattaattatcatgatgcattccttgatccattactaagcagtgaattgccatat
ccatttctgagttacacagtgctcattatctttaccttacttattccaatccttcttatg
aacttgctaattggtttggctgttggggacatagctgaggtgcaaaaatacgcagcactc
aaaaggattgcaatgcaggtcaatcttcacacaaacttagagaagaagctaccgttttgg
ttcctaagtcgggtggaccaggaatcaatcaccgtatatcccaacaggccaagatactgt
ggatttatgagtgttttccagtattgctttggctgtgaggactctgccacagatgcacaa
agcactgatacaactttagaattggaagttctgaagcagaaatacaggctcaaagatata
tcaacattattggaaaagcagcacgacctcattaaattgattatacaaaaaatggagata
gtgtcagaggctgaggatgaagacagcaatgatttatttcagcacaagtttaggaaaagg
cagttagaacacaagaatagtaaatgggatacagtgttgaaagctgttaaaacaaatgca
cctaacccaagcacagaaaagaacaatagcttcttctag
DBGET
integrated database retrieval system
