Struthio camelus australis (South African ostrich): 104153984
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Entry
104153984 CDS
T08512
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104153984 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scam03400
]
104153984 (MSH2)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104153984 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104153984
NCBI-ProteinID:
XP_009688446
Ensembl:
ENSSCUG00000004160
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MAETQRKGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNRAGSKSTKENDWYLAYKG
SPGNLAQFEEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDSTLRKLSVCEFPDNDQ
FSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKAEFTTKDIVQDLNR
LLKSKKEEQTNSAALPEMEKQVAISSLSAVIKFLELLSDESNFGQFELTTFDLSQYMVLD
NAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLV
EAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQALEK
HEGDHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELRG
KMNELEENMQSFLKSAAKELGLEAGKSVKLESNSQFGHHFRITCKEEKVLRNNSKYRIID
TQKNGVKFTNSKLSSVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLD
AIVSFAHVSNGAPVPYVRPALLEKGQGRIVLKGSRHPCIEVQDDVAFIPNDITFEKGKQM
FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVS
TFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIATKICAFCMFATH
FHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIES
AREKALELEEFQNIGKSKESEGEPPAKKPYREREEGEKIIQDFLCQVKALPLTDMSEEDI
KTKLKQMRTEVLSKNNSFVNEIISRTKVTS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagaggaaaggaaatcagaaactggaaagtgttgtgcttagtaaaatg
aactttgaatcgtttgtgagagatctgcttctggttcgtcattacagagtcgaagtttac
aagaacagagcagggagtaaatctaccaaagaaaatgactggtatttggcatacaagggt
tctccaggaaacctcgcccagtttgaggaagttctctttgccaacaacgacatgtcaact
gccattggggttgtgggggtgaagctgtctactactgatggacaaagagtagttggagtg
ggatatgttgatagtacactaagaaaattgagtgtctgtgagtttccagataatgatcag
ttctcaaaccttgaagctctactggttcagctaggacctaaggagtgtgtgctaccagga
ggagagactgctggagagatgggaaaactgcgacaagtcattcagagaggaggaatcctg
attacagacagaaagaaggcagagttcacaacaaaagatattgttcaggatctcaatcga
ttgttaaagtcaaaaaaagaagaacaaacgaatagtgcagcattgccagagatggaaaag
caggttgccatttcatctttgtcagctgttatcaagtttttagagttgctgtcggatgag
tctaatttcggacaatttgaactgactacttttgatcttagtcaatatatggttctagat
aatgcagctgtccaagccctcaaccttttccagagttctgtggaaaatgctaatactgca
cagtcactagctggtttactgaataaatgcagaacccctcaaggacaaagactagttaat
cagtggatcaaacagccacttatggataagaatagaattgaagaaaggttgaatttggtt
gaagcctttgtggtagatccagaactacgtcagtgccttcaggaagatcttttacgtcgc
ttcccagatctcaaccggctagcaaagaaatttcagaggcaagcggcaaccttacaggac
tgttaccgaatgtatcaggctattaatcaactgcctaacgttgtacaagcgctagaaaaa
catgaaggagatcaccagatgttgttgttggcagtgtttataacgccgcttaatgatatc
cactctgacttctcaaagtttctggagatgatagaaacaacattagacatggataaggta
gagaatcatgaatttcttgtcaaggcttcttttgatcctaacttgacagaattaagagga
aagatgaatgaactggaagaaaatatgcagtctttcttaaagagcgcagccaaagaacta
ggtttggaagctggcaaaagcgtcaaactagagtcaaattcacaatttggacatcatttt
cgaattacttgcaaggaagaaaaagttctccggaacaactcaaaatacagaataattgat
acacagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgaagaatat
ataaagaacagagaagagtatgaggaggctcaggatgcaattgttaaggaaatcattaac
attgcttcaggttatgccgagccaatacagacaatgaatgatgtgatagctcaattagat
gcaattgtcagttttgctcacgtgtcaaacggagcaccagtgccgtatgtccgtcctgcc
cttctggaaaagggtcaaggaagaattgtgctgaaaggttccaggcatccttgcatcgag
gtgcaagatgatgtagccttcatccccaatgacattacgtttgagaagggcaagcagatg
tttcacattattactggccctaacatggggggaaagtcaacatacatccgacagaccggg
gtgatagttcttatggcccaaattggatgttttgtaccatgcgactctgcggaaataacc
attgtggattgtatcctggcgcgggtaggagctggggacagccagctgaaaggtgtgtct
actttcatggctgaaatgttagaaactgcatcaatccttaggactgcatcagaaaactcc
ctgataatcattgatgagctgggaagaggaacttctacctatgatggctttggcttagcg
tgggctatttcagagtacattgctaccaaaatttgtgctttctgtatgtttgctacacat
ttccatgaactgacagcgcttgctgaccaggtgcccacagttaataatctacatgttact
gctctgaccagtgatgacacactcacgatgctttaccgtgtcaaggaaggtgtttgtgac
cagagttttggaatacacgtagcggagttggcagcttttccaaaacatgtaatagagagc
gcgagagagaaggcactggagctggaggagtttcaaaacattggcaaatcaaaggaatct
gaaggagaaccaccagccaagaaaccttacagagaaagagaggaaggtgaaaaaataatt
caggattttctttgtcaagtgaaagcattgcccctgacagacatgtcagaagaagacatc
aaaaccaagctgaagcagatgaggactgaagtgttgtcgaagaacaacagttttgtgaat
gaaatcatttcacgaacaaaagttacgtcatga
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