Struthio camelus australis (South African ostrich): 104154006
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Entry
104154006 CDS
T08512
Symbol
SUPT6H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104154006 (SUPT6H)
03036 Chromosome and associated proteins [BR:
scam03036
]
104154006 (SUPT6H)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104154006 (SUPT6H)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104154006 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104154006
NCBI-ProteinID:
XP_009688516
Ensembl:
ENSSCUG00000000147
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVNKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAAQEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
DETLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVXMTPSYSY
TPPSQPITTPQYQLQANTTPQSTQSQAQSQPSSSSRQRQQPKANSHAAIDWGKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagctgaggagtcggaagaggagtacaaccaggatggg
gaggttgttcccagagtaaacaagaaatttgtggaggaagatgaggacgatgaggaagaa
gaggaggagaatctcgatgatcaagatgagcaaggaaacctgaaaggattcattaatgat
gatgacgacgaagaggaggaggaggaggaggaagccagtgactctggagactccgaggac
gatgttggccacaaaaagagaaagcgcactttcgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcga
aaaatgtccgatgatgaggatgacgaagaggaggattatgggaaagaagaacacgagaag
gaagccattgctgaagaaatctttcaggatggtgaaggcgaggaggggggtgaagctgtt
gaagctcctgttgctgcacaagaggaggaagaggaggaggaagaagatgaatctgacatt
gatgacttcattgtggatgatgatggacaacctctgaagaagccaaaatggcggaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggacttt
gactatgatgagtttgagaagtacaatgagtatgatgaggagatggaggaggagtatgag
tacgaggatgaagaagctgaaggggagacccgtgtccgacccaaaaagactgccaagaag
cgtgtcagtcggcgtagcatctttgagatgtatgagcccagtgagctggagagcagtcac
ctaacagaccaggacaatgagatccgcatgacggacatgcctgagaggttccagttgcgc
tccatcccggtgaagagtgctgaagatgatgagctggaggaagaagccgactggatttac
aggaatgcatttgcgacacccaccatctccctgcaggaaagttctgactatcttgaccgt
ggacaagccagcagcagctttagccgtaagggacctagcactatccagaagattaaagaa
gctctgaatttcatgagaaatcagcattttgaggtcccattcatcgccttctacagaaag
gaatacgtagagccagagctgcacatcaacgacctgtggagggtttggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctctttgagaagatgcag
gcctatcagtatgagcaaatctctgctgacccagacaaacctttggctgatggaataagg
gctcttgataccactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaa
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaaggt
gaaggggaggatgcagaagatgatgagcagaaagggcctgagctgaagcaggcatcccgt
cgggatatgtacaccatctgtcaaactgctgggctggatggcctggctaagaagtttggt
ttgacacctgagcagttcggagagaatctccgggacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggactatgtgtgtagtcaattcccaagc
ccagaagctgtgctagaaggagcccgatacatggtggctttgcaaatagccagagagcca
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaagggaaagaaggatattgatgaagcccattatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctagcagag
gatgagacactgctgaccattgacatcagcattgacatgaaaggagtggagggttatggt
agtgaccagacgtactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaggagtggaaccggcagcgtacaatggctattgagcggtcccttaaccagttc
ctctatgtgcagatggctaaagagttaaaaaacaagctgttggtggaggccaaggagtat
gtcctcaaggcttgcagccggaagctgtacaactggctaaaagtagcttcgtatcgccct
gatcagcaagtggaggaagacgacgatttcatggacgaaaaccaagggaaggggattcgg
gtgctaggcattgcgttttcttcagccagggaccaccccgtattttgtgcccttgttaat
ggggagggcgaagttacagacttcctccgattgccgcacttcacaaagagaaggaatgcg
tggcgtgaggaagagagggaaaagaaggctcaagatattgaaactttgaaaaaattcctc
ctgaacaagaagccccacgtggtgacgattgcaggcgagaacagggatgctcaaatgttg
atggaggatgtaaagagaattgttcatgagctggatcaggggcagcagctgtcctctatc
ggagtggagctggtagacaatgaactggccatcctctatatgaacagcaaaaagtctgag
aacgagttccgggattacccacctttgttgcgtcaagctgtctcccttgctcgccgcatt
caggatcctcttatagagtttgcccaggtctgcagctctgatgaggatatcctctgtctg
aaactccaccctctgcaggaacacgtggtgaaggaggaactgctgaatgccctctactgc
gaattcataaaccgtgtgaatgaggtgggcgtggatgtcaatcgggcaattgctcaccca
cacagccaggctttgttgcagtatgtgtgtggtctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacactcgtctggagaatcggacccagctggttacgatg
tgtcacatgggacccaaggtgttcatcaactgtgctggcttcatcaaaattgacacagca
tcactgggcgatagtaccgattcctacattgaagtcctagatggatctagggtccatcct
gaaacctatgaatgggcaagaaaaatggcagtagatgccttagaatatgatgagtcggca
gaggatgctaatcctgcaggagccctagaggagatcttagaaaaccctgagcgtctgaaa
gacctggatcttgatgcctttgctgaggaactggaaagacagggctacggtgacaagcat
atcactttatatgacatccgagctgagttgagctgcaggtacaaggacctgagaacccca
taccgctctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccagagact
ttttatataggtaaaatgatcatctgtaatgtgactgggatagcccacaggcgacctcaa
ggagaaagctatgaccaggcaatacggaacgacgaaaccggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagtgaggtttggaatcactttgacagcggttcc
tgcccaggtcaggccataggagtgaagacaaggctggacaatggagtcgctggcttcatc
ccaacaaaattccttagtgataaggtggtcaagcggcctgaagaaagggtgaaggtggga
atgactgttcactgcaggattatgaagattgacattgagaagttcagtgctgacctgacc
tgcaggacttcagacctaatggataagaacaatgagtggaagttgcctaaagacacgtac
tacgactttgacgctgaggcagcagatcacaagcaggaagaagacctgaaaagaaagcag
cagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacatcagcttc
aagcaagctgagaagatgatggagacaatggaccaaggggatgtgatcattcggccaagc
agcaaaggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcac
gtggatgtccgagaagagggcaaggagaatgccttcagtctgggctccacgctttggatt
aacacagaggaatttgaagacctggatgaaattgttgctcgctatgtccagccaatggct
tctttcgccagagacctgttgaatcacaaatactatcaggactgtaatggtggagacaag
aagaagctggaagagctgctgataaagacgaagaaagagaagccaacttttattccctat
tttatcagtgcctgtaaagatctacctggcaaatttctcttggggtatcagcctcgaggc
aaaccaaggatagagtatgtgacggtgacgccagaaggattccgctaccggggccagatc
ttccctaccgtgaacggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagtagtagcagtcggaccaggactccagcctccattaatgctactcca
gctaacattaacctggcagacctgactcgtgcagtgaacgctctaccacagaacatgacc
tcccagatgttcagtgccatcgctgccgtgacaggccagggacagaaccccaatgccacc
cctgcacagtgggcgtccagtcagtacggctatggaggcagcggaggtggcagcagcgcg
taccacgtcttcacgactccagcgcagcagccagtgngcatgacccccagttactcctac
actccccccagccagccaattacaacaccccagtaccagcttcaggccaacaccacaccc
cagtccacccagtcccaggcacagtcacagccgtcatccagctccagacagaggcagcag
ccaaaggccaacagtcatgctgcgatcgactgggggaagatggccgagcagtggctacag
gagaaggaggctgaacggaggaaacagaagcagcggttgactcctcgtccgtctcccagc
cccatgattgagagcacgcccatgtccatcgctggggatgccacaccactgctggacgag
atggatcgatag
DBGET
integrated database retrieval system
