Struthio camelus australis (South African ostrich): 104154022
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Entry
104154022 CDS
T08512
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104154022 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scam01009
]
104154022 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104154022 (PCDH1)
Protein phosphatases and associated proteins [BR:
scam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104154022 (PCDH1)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Protocadherins
104154022 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
104154022
NCBI-ProteinID:
XP_009688498
Ensembl:
ENSSCUG00000004343
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MKPLASCLGVWLLFQLPALVSGTRVVYKVQEEQPPNTLIGSLASDYGFPDMGHLYKLEVG
APYLRVDGKTGDIYTTETSIDRESLHECQHLLPGHPCLLEFEVSITDLMMNSSPRLLEGE
IEVLDINDNTPNFASPVIPLSIHENTNIGALFSIPLAMDRDSGPNGVASYELVAGPEAQE
LFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMND
NAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDIVRRLLRLDRT
TGLITVQGPIDREDVSILKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLV
THQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKK
YFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAF
PENNEPDDLVMEVSASDADSGSNAELVYSLVMDPSSKGSFTIDPDSGEIRVKAMLDREQR
ERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVT
VIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPR
SAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELTYS
ITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNET
LANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVR
YCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKS
LKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQD
LPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQH
SYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAM
TGTCTRECTEFGHSDTCWMPGQSSPNRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEE
RSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSSQTTKREIYL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactagcatcctgcctgggcgtgtggctcctcttccagctccctgccctggtc
tctgggacgcgtgtggtctacaaagtgcaggaggaacaaccacccaacacacttatagga
agcctggcctctgactacggcttcccagacatggggcacctctacaagctggaagtgggg
gccccctatctacgtgtagatggcaagactggggacatctacaccacagagacctccatt
gacagggagagcttgcatgagtgccagcacctcctacctggacacccctgcttgctggag
tttgaagtgtccatcactgacctgatgatgaacagcagcccacgtctccttgagggggag
atagaggtgctcgatatcaatgacaacacccccaactttgcctcccctgttatccccctg
tccatccacgagaacaccaacattggggcactcttctccatccccctggccatggaccgg
gactcgggtcccaatggcgttgcctcctatgagctagtggctggtcctgaggcacaggag
ctctttgggctgcaggtggctgaggatcaggatgagaagcagccacagctgattgtcatg
gggaacctggaccgggagcagtgggactcctatgacctgaccatcaaagtgcaggacgga
ggcaacccaccacgggcaagcagcgccctgctacgcatcaccatcctggacatgaatgac
aatgcgcccaagtttgagaaggccctgtatgaggcggagctctccgaaaacagccctgtg
gggcactctgtcctccaggtgaaagccaatgactcagatcagggcgccaatgccgaaatt
gactactccttccaccaggcctcagacatagtgcgtcgtctgctgcgcctcgatcgcacc
acggggctcatcactgtgcaggggcccatcgaccgggaggacgtcagcatcctcaagttc
tccgtcatggccaaggataagggggccaaccccaagagcgcccgcacccaggtggtggtc
accatcaaagacatgaatgacaacgctccctccatagagatccggggcattgggcttgtc
acccaccaggatggcatggcgaacatctcagaggatgtgccggtagagacagctgtggct
ctggtgcaggtatctgaccgagatgaaggtgaaaatgccgttgttacctgtgtggtagct
ggtgatgtcccattccagctgcggcaggccagtgaaacaggaagtgatagcaagaagaaa
tacttcttgcagaccaccacaccgctggactacgagtcagtgaaggaatacacaattgag
attgttgcagtggactcggggaacccacccctctccagtaccaactccctgaaggtgcag
gtggtcgatgtgaatgacaatgcacccgtcttcagccagagcttcaccgaggtggctttc
cctgagaacaatgagcccgatgacctagtgatggaggtgagcgccagtgatgctgacagt
ggctccaatgccgagctggtttactccctggtgatggacccctcctctaagggctctttc
accattgaccccgactctggggagatccgagtgaaggcaatgctggaccgagaacagagg
gagcgctatgaattcttggtggtggcagcagacaagggcagccccagcctcaagggcaca
gcgtctgtggccatcaacgtcatggacaggaatgacaatgaccccaagttcatgctgagt
ggctacaacttctcagtgatggagaacatgccgcccctcagccctgtgggcatggtgacg
gtgatcgatgctgacaaaggagaaaatgcccgcatccagctgtcggtggagcaagacaat
ggggattttgtgattcagaatggcactggcaccatcctatccagcatctcctttgaccgg
gaacagcagagtacgtacactttccgactcaaggccgtggatggtggggaccctcctagg
tctgcctatgtgggggtgaccatcaatgtgttggacgagaatgataatgcccccttcatc
acttcaccttccaatgccacctacaaacacatcctgccccacaccagccctggtcagcag
gttagcaaggtcaaggcagaagacattgattctggtgtcaatgcggagctgacctacagc
atcacgggaggcaacccctttgagctcttccagatctccccacacagtggagacatcacc
ctggagaaggagatcctgcgcaagcaccacggcctgcaccgcttggtggtgcgcgtcaac
gacaagggcaagccctcacggcatggcacggcactggtgcacttctacgtcaatgagaca
ctggccaaccgcacactgctggacacgctggtggggcacagcctggacacacctctcgac
atagacattgctggtgaccccgaatatgagcgcagcaagcaacgaagcaacattctcttt
ggagtcattgctggcattgtggctgtcaccctcgtcatcgtgctggttgtcctggtgcgc
tactgtcggcagcgggaggccaagagtggctaccaggcaggcaagaaggagaccaaggac
ctgtatgcacctaagcaagccagcaagagtggtaagagcaagaacaaagtgaagaagagc
aagtccccaaagccacctaagcccacagaggatgaggaggagacagggctgcagaaatca
ctcaagttcaacctcatgaatgactccgtcagcgatagcccccgcatccacctgcccctc
aactacccaccggggagcccggacctggggcgccactaccgctccaactcgcctctgccc
tctatccagctgcagcctcagtcaccctctgcttccaagaagcaccaggtggtgcaggac
ctgccagccaccaacacctttgttggcaccggggacaacaactcgacaggctccgagcag
tactcggactacagctaccgcaccaatccccagaaatacaccaacaagcagttacctcat
cgccgagtgacgttctctgcagccagccaggcgcaggacctgcaggatccctcccagcat
agttattatgacagcgggctggaggagtcagagaccccaagcagcaagtcatcatcaggg
ccccgcattgggcctctagccctgcctgaggatcactacgaacgcaccacacctgacggc
agcatcggggaaatggagcaccctgagaacgatctccggcctctgcctgatgtagccatg
actgggacctgtacccgggaatgcacagagttcggccactccgacacctgctggatgcct
ggccaatcctcccccaatcgcaggcccaagaatgccctcaaactctccacttttgtgcct
taccaagatagagggagtcaagagcaagttgggaatggcagccccagactctcagaagag
cgcagcaccaaaatggccaacctccgcctgctccccacgtacagtgccttctccaatagt
agccatgagccctgcaaggactctcccatggaggaaattcctctcacccagacctcggac
ttccaaccagccactaccccctcatcccaaaccaccaagagggagatatacctgtga
DBGET
integrated database retrieval system
