Struthio camelus australis (South African ostrich): 104154026
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Entry
104154026 CDS
T08512
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104154026 (PCDH12)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Protocadherins
104154026 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Tmemb_9
Motif
Other DBs
NCBI-GeneID:
104154026
NCBI-ProteinID:
XP_009688505
Ensembl:
ENSSCUG00000004351
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MPRICTYCKLCLGMQRYIDKSADLGQSGSAVGFLRSMLLLCRFTLQIPALWWYLFLSVDA
QEVATFTVQYKVFEEVPNGTVIGKLSEHFGWGEGSKTAETFQLMQFPRRFPLRMGSGDGL
LSTAGRVDREQLCRHNDPCLVSFDVLTARNSALIHVEIQVLDINDNKPQFPTPELELEIS
ESASLRTRIPLDRALDPDAGRNALCSYSLSPSEHFALEVVSGSDGTKHAELVVVKEVDRE
LHSSFDLILTAVDHGEPPKSGTALIKVIVLDSNDNSPVFAESSLTVEIWEDALPGTRLIT
VTATDPDQGPNGEIEYCLSKHAPLEVLSTFSIDTRTGSVVLKHPLDYEEIHAYELDVQAR
DLGANPIPAHCKILIKVLDVNDNAPDVHITWAARVPVLSEALPKDSFVALVTASDPDSGN
NGQVHCSLSQGYEHFRLKRTTSHSFVLMTNATLDRELCAEYNLTLLVQDQGNLSLTVFKY
LTICISDVNDNAPEFEKGTYDTAIAENSQSPFYLITVSANDPDLDFNGKITYSIQDSFVS
GLVSIDPSTGDIFALQAFDHEQMSSLEFLVTAEDGGHPKLVSNVSVRLAVLDENDNAPVI
TEPALVGGAATISVLVSPQTGCFCTAPGNWSAPGAAPVNMTRVSCSDAPLLFTITARDMD
SGRNGALQYVIVGGNEAQLFVLDPLSGQVFLNSSNASSLAGSQRELVIRVSDRGDVPLHT
QACMRLVFRNHGAFSKISAQGSQRLSPSVVTVICLAALLGMFLLILVLIVSLCKKEKKDS
MAYNCREAEDAYRQQQLKKPHRQIQKTDIHLVPVLRSRSEGPREAELLRPCEEALLSESA
MDPEYGGSLQAPFHLTPTLYRTLRNQRNQRDSDEQQDAFNLTLMQRRPCQPHKLKNSAKE
PASSLDALPHCKSLVKPQLRPVGDSLPPASQPTGTALKGRSGAEVDGAPGEAQPHQHILR
SLVRLSLVALAEQSPTGEFAMESPPVQQISQLLSLLHQGQFQPKTNHRGNKYTTKNGSRA
AGLDADCLSTKDSGHGESEAEDRDSENGFDLSMQQLVGEELETLLEPQAELALKRLTAAD
PEWVARLSLPLTSSYKDNVFSPDSLHSPQDQEAARQEKPRTFETFGKVTESDSSAAGTKL
ASTFLSEMSTLFEMILSQKVQAHNETGSGLLRQLSARGKSLGLDDSAPVP
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggatttgcacatactgtaagctttgtttgggtatgcagagatacatagacaaa
tccgctgacctgggacagagcggcagcgcggttggctttctcagaagcatgcttttgctg
tgccgctttactcttcagatcccagccttgtggtggtacctttttctctctgtggatgcc
caggaggtggccacgttcacagtgcaatacaaagtgtttgaagaagtaccgaatggaacg
gtaataggaaaattatcggagcattttggttggggtgagggaagtaaaacagcggaaacc
ttccaactgatgcagtttccaaggaggttccctctccggatgggaagtggggatggcttg
ctcagcactgccgggcgggtggacagggaacagctctgcaggcataacgatccatgcttg
gtctcttttgatgtgctgactgcccgaaattcggctctaatccatgtggagattcaagta
ttagatatcaatgataataagcctcaatttccaacccctgaactggagctggagatttca
gagagcgcatctttacggacacggatcccgctggaccgagccttggatccggacgctggc
cgcaatgcgctctgctcctactcgctttctcccagcgaacactttgctctggaggttgtc
tcaggctctgatggaacaaaacatgcagagcttgttgttgttaaagaagtagaccgagag
ctgcactcttcttttgatctaatattgacagctgttgatcatggggaaccgccaaaatca
ggtaccgctctaattaaagtcatagttcttgactccaatgataacagccctgtctttgca
gagagctctttgacagtagagatttgggaagatgctctacctgggactcgtctcataaca
gtcacagccaccgaccctgaccagggtccaaacggagaaatagagtactgcctcagcaag
cacgctcccctggaggtgctgagcaccttcagcatcgatacccggactggcagcgttgtc
ctgaagcaccccctggactacgaggaaatccacgcctatgagctggatgtacaggccaga
gatctgggcgccaatcccattccagcacactgcaagatcctcatcaaagtgctggatgtc
aacgacaacgcccccgatgttcacatcacctgggctgctcgagtgcctgtgctctccgag
gcccttcccaaagacagctttgtggctctggtgaccgctagtgaccccgattcaggaaac
aatggacaagtgcattgctctcttagtcaaggatatgaacacttcaggctgaaaaggacc
accagccacagtttcgtgctgatgaccaatgccaccctggacagagagctgtgtgctgaa
tacaacctgaccttgctggtgcaagaccagggcaatctctccttaactgtgttcaagtac
ctcactatttgtatcagtgatgttaatgacaacgccccagaatttgaaaagggtacctac
gatactgccattgctgagaacagtcaatcacctttttacttgattactgtcagtgccaat
gatcctgacttagatttcaacggaaaaatcacctacagcatccaggattcctttgtttca
ggtctggtctctattgaccctagcactggggatatttttgccctccaagcttttgatcac
gagcaaatgagcagcctcgagttcttggtgaccgcagaagacggcggtcaccccaaactc
gtgtcaaacgtctctgtgaggttggctgtgcttgatgagaacgacaatgcccccgtcatc
actgagccggcgctggtgggaggcgctgcaacgatttccgttctcgtcagcccacagacg
gggtgcttctgcacagcccccgggaactggagtgcccccggggcagcacctgtgaacatg
acacgcgtgtcctgctcagacgctcccctgctctttaccatcacagccagggacatggac
tctggccggaacggagctctccagtatgtcattgtgggtgggaacgaagcccagctgttt
gtcctcgatccactctcagggcaggtgttcctcaactccagcaatgccagtagcctggct
gggagccagagggagctggtgatacgtgtgagtgacagaggagacgtgcccctgcacacc
caggcctgcatgcggttagttttcagaaatcatggtgctttctccaaaatctcagcccag
gggtcgcagaggctgagcccgtcagtagtcactgttatctgcctggctgctctcttaggc
atgttccttcttattctggttttaattgtgtctttgtgcaaaaaagagaagaaggatagc
atggcttacaactgcagggaggcagaggacgcctacaggcagcagcagctcaagaagcca
cacaggcagattcagaagacagacatacacctagtcccggtgctcaggagcaggtcggag
gggcccagagaagctgagctcttgcgtccctgcgaggaggctctgctgagcgagagtgcc
atggaccctgagtacgggggctccctgcaggctcctttccacctgacccccactctctat
cggaccctgagaaaccagaggaaccagagagactcagatgagcagcaggatgcttttaac
ctcactctaatgcagcgtcggccctgccagcctcacaaactgaaaaattcagccaaagag
cctgcgagctctctggacgcactgcctcattgcaagagcttggtgaagccacagctgagg
ccagtgggagactccttgccaccagctagccagcccacgggcacagctctgaaggggcgg
agtggtgccgaggtggacggggcgcctggcgaggcccagccccaccagcacatcctcagg
agcctggtccggctctccctggtggcgcttgcagagcagagccccacgggggaattcgcc
atggagtcgcccccagttcagcaaatctctcagctgctgtccctgctgcaccagggccag
ttccagcccaaaacaaatcacaggggaaacaaatacacgaccaagaacggtagcagggct
gcagggctggatgccgactgcctgagtacgaaggacagtggccatggagagagcgaggca
gaagaccgtgattcagagaatgggtttgatctttccatgcagcaactggtgggagaagaa
cttgagacccttctggaaccgcaggcagagctggccctcaagaggctgacggctgctgac
ccagaatgggtggctcggctctccttgccgctcaccagtagttacaaggacaatgtcttc
tcccctgattctctgcattcacctcaggaccaggaagctgcaaggcaggagaaaccaagg
acctttgagacatttggcaaagttactgagtctgactcgagtgccgctgggacaaaactg
gccagcactttcctttcagaaatgagcaccctctttgaaatgattttgtcccagaaggtc
caagcccacaatgaaacaggctcagggcttctgcggcagctgtcagcacgtgggaagagc
cttggactggatgacagtgctcctgttccgtag
DBGET
integrated database retrieval system
