Serinus canaria (common canary): 103812408 Help Entry 103812408         CDS       T05755                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism scan  Serinus canaria (common canary) Pathway scan04382   Cornified envelope formation scan04510   Focal adhesion scan04512   ECM-receptor interaction scan04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:scan00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103812408 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103812408 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     103812408 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103812408 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:scan04147]     103812408 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:scan00536]     103812408 (COL4A1) Exosome [BR:scan04147]  Exosomal proteins   Exosomal proteins of other cancer cells    103812408 (COL4A1) Glycosaminoglycan binding proteins [BR:scan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103812408 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  103812408 NCBI-ProteinID:  XP_018764544 UniProt:  A0A8C9MPZ1 LinkDB All DBs Position Unknown AA seq 1669 aa AA seqDB search MRLWLGFGLLLSAELSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG PPGPPGLKGDTGEPGLPGTKGTRGPPGVSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG ERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVVGLLAPGVLKGEKGFPGQPGLPGPPGAS GFQGPMGPMGPPGEPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHMK EKGSEIIKGEKGDPGEKGEQGFPGLPGSGFKGDKGEPGQPGPRGKPGKDGEPGLKGEPGL PGGFGIPGRPGEPGTKGDKGERGFPGPPGRMIDAGPVDTFGEKGDPGVSGLPGLKGQKGE KGFPGAQGIPGPPGRPVPDRVGSPGVPGERGEKGEKGSPGFPSPGIPGRDGFPGPPGLPG PPGPPGITDGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGEACALCDKVGPPGLPG PQGPPGPAGFPGQAGFKGDRGLPGLDGLPGVPGPPGTPGLMGSPGPKGEPGDFTYDSILK GEKGDPGFPGQPGIPGREGRPGKDGFPGPQGPKGEAGTAGLKGERGPPGQPGFPGVRGER GFPGSPGIGAPGLPGEKGDRGFAGTPGLPGLPGAKGEAGRTISLPGPPGADGLPGPPGFP GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGQPGTPGTPGLDG LPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGSPGLPGLRGEQGFPGIPGQQGF RGDPGLPGLQGLQGPPGAPGLGPPGLPGPAGQPGPQGPPGFPGIKGERGFPGVPGLDMPG PKGDKGSPGQPGVPGSVGLPGLPGPQGAVGLKGSTGPKGEMGVMGTPGLPGTPGPVGDRG FPGEKGSQGFKGVIGPQGDPGVKGDKGEAGLPGKPGTIDNMDMVSLKGQKGDQGEKGDHG ATGEKGLRGDYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGVPGQKGSVGEMGLPG TPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGAPGEKGEPGRTGSPGVSGD KGEKGSAGVPGMPGAPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLSGIPGLKGEPGEPGL PGPAGATGQKGEPGYDGIPGAAGAKGEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGSP GIPGLKGEPGYAGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG LKGAKGEQGSNGWPGTPGGPGMKGDPGFQGLPGSPGLPGGVGPKGDLGPPGIPGVPGPKG TPGFPGLKGERGDQGLPGSKGLQGPPGPPGPFQLIKGDPGLPGPVGPVGLKGFPGLPGPK GQQGVTGPSGVPGPPGSPGFDGQPGQKGEAGPFGPPGPRGFPGPPGPDGLPGAMGPPGAP SVAHGFLVTRHSQTIEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMNMAPITGDNIRPFISRCSVCEAPAMVIAV HSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERNEMFRKPTPSTLKAGDLRSNVSRCQVCMRKT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgcggctctggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtccgcc gcgggatgttctggttgtggaaaatgtgattgcagtggagtaaaaggacaaaagggagag agaggcttgccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt cctcctgggccaccagggcttaagggtgatactggagaaccaggattgccaggaacaaag ggaacaagaggccccccaggagtatcaggcttcccaggaaacccaggccttcctggcatt cctggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggt gaaagaggtccagtaggtcccccaggtttaccaggactgactggaagtataggacctcca ggacctcctggaatgaagggagatccaggtgaagtggttggtcttttagctcctggtgtg ctaaaaggtgaaaaagggtttcctggccaacctggactgcctggtccacctggtgcttca gggtttcagggaccaatgggaccaatgggccctccgggagagccgggtcccccagggcca ccaggacttccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaa aagggagaacaaggggtaaggggccctccaggacccccaggaccagcacctcatatgaag gaaaaagggagtgaaatcataaagggagaaaagggtgatccaggtgaaaagggcgaacag ggattcccaggattgccaggttcaggtttcaaaggagacaagggtgaacctgggcagcct ggtccacgtggaaagcctggaaaagatggtgaaccaggactgaaaggagaacccggtttg cctggagggtttgggattccaggacggcctggggaacctggcaccaagggtgacaaaggg gagcgaggttttccaggacctccaggaagaatgatagatgctggaccagtagataccttt ggtgaaaaaggagaccctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaa aaaggcttccctggtgcacaaggaatcccaggacctccaggtcgaccagttccagacagg gtaggatcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttctcctgga ttcccttcacctggaatccctggaagagatggtttcccaggtccccctgggttgcctggc ccaccaggacctccaggcataacagatggaattgatcagtgccagcagggagaacctggt gcaccaggtagtcctggacttccaggcagagatggatttccaggagagatgggagagaaa ggtgacaaaggtgaagcctgtgccttgtgtgataaagtaggacctcctgggcttccagga ccacaagggccaccaggtccagcaggttttccaggacaagcaggtttcaagggtgacaga ggcttacctggacttgatggccttccaggggtgcccggtccccccggcactccaggactt atgggcagccctgggccgaaaggagaacctggagatttcacttacgattctatcctgaaa ggcgaaaagggcgatcctggtttcccaggacagccaggcattcctggaagagaaggaaga ccaggaaaagatggatttccaggtccccagggtccaaaaggagaagcgggtacagctggc ttgaaaggagagcgtggtccccctggccaacctggattccctggagtgcgtggtgaaaga ggttttcctggctctcctgggataggtgctccaggattacctggtgaaaaaggagacaga ggctttgctggaaccccgggtttaccaggacttccaggagcaaagggggaagcaggacgg actatatcgctccctggacctcctggggcagatggccttcctgggccacctggtttccct ggaccccaaggtgacaaagggaatcctgggcttccaggtagacctggcctaccaggagaa aaaggtgctgttgggcagccagggatagggttccctggacctccaggtcccaaaggtttc caaggtcagcctggctcacctggtcagccaggaactccaggaactcctggtctggatggt ttgccaggagttccaggtttacaaggccaaaagggtgaacctggtgtaggtctgcctggc cctaagggattgccaggcccccctggcccagctggcatccctggagagaagggaagtcca ggactgcctggtttacgtggcgagcagggctttccgggtatacctgggcagcagggattc agaggtgaccctggtctcccaggtctccaaggcttgcagggccctccaggtgcaccgggg ctgggccctccaggattgccaggacccgctgggcagccgggaccccagggaccaccagga tttcctggaataaaaggagaaaggggcttccctggtgtcccaggtctagatatgccagga cctaaaggggataaaggtagcccaggccagccaggagtcccaggctctgtggggttacct ggcctgccaggtccacagggggctgttggactgaaaggatcaacaggacccaaaggagaa atgggagttatgggaactcctggattaccaggaactcctgggccagttggagatcgaggg tttcctggtgaaaaaggtagccaaggtttcaaaggtgtaattggaccacagggtgatcct ggtgttaaaggagataaaggtgaagctggtctcccaggaaaacctggaacaatagacaac atggacatggttagcctcaaaggccagaagggagatcaaggagaaaaaggggaccatgga gcaacaggagaaaaagggctacgtggggattatggagagccaggaattccagggagagat ggtgaacctggtactccaggacaaccaggtccaaaaggcgatcaaggccccccagggtat ccaggggatccaggagttccaggacaaaaaggatcagttggtgaaatgggtttgccagga acacctggagaaaagggtctgcctggagtaccaggctcaccaggcacaccagggttccct ggacaaaaaggcgaaaaaggagacaaaggagctccaggttttcctggaattggcttccca ggggctcctggtgagaagggagaaccaggaagaacaggtagtccaggtgtatctggagat aagggtgaaaagggtagtgcaggagttcctggaatgccgggtgccccaggtcccaaagga tcccctggcatggcaggatttccaggaagccctggccgccatggagaaaagggtgaaaaa ggacttcctggcttaagtgggattccaggtttaaaaggagaaccaggtgaacctggtctt ccgggtcctgctggtgccactggtcagaaaggtgaaccaggttatgatgggattccaggt gcagctggtgcaaagggtgaacaaggtcttccaggtagaggacttccaggatttcccggt gcaaagggagataaaggtgcaaaaggtgaagtgggttttccaggatccccaggaagtcca gggatcccaggcctgaaaggggaaccaggatatgcaggtccaccaggtcctaaagggaac caaggtcttcctgggctaccaggaagtgcaattgaaggccctaaaggagacagaggaccc caaggccaacctggtcttccaggtttaccaggtccaacagggccaccaggacctccaggt ctgaaaggggccaaaggagagcaagggagcaatggctggccagggactcctgggggtcca ggaatgaaaggtgacccgggtttccaaggactgccaggtagtcctggtttgccaggaggt gttggtccaaagggtgatctcggacctccaggaattccaggtgttccaggtccaaaaggg actcctggtttcccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaa ggcttacaaggtccaccaggcccaccaggtcctttccagcttattaaaggggatcctggc ttgcctggacctgtaggaccagttggtctcaagggattcccaggacttcccggtcccaaa ggacagcaaggggtgacaggaccttcaggtgtacctggaccacctggtagtccagggttt gatggtcagcctgggcagaaaggagaagctggtccttttggtcccccagggcccagagga tttcctggtccacctggccctgatggcttgcctggggctatgggcccaccaggggcacca tctgttgctcatggcttccttgttaccagacacagtcaaaccattgaggaaccgtcgtgt ccgtttggaacgaggctgatttaccacggctactccttgctttatgtacaaggcaatgaa agagcgcatggccaagatctgggcacagcaggaagctgtcttcgtaaatttagtaccatg cctttcttattctgcaatatcaacaacgtctgtaattttgcatcaaggaatgactactcc tactggctgtctactcctgagcccatgccaatgaatatggctcctatcactggtgataat atcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaatagctgtt cacagtcaaacaattcaaataccaccgtgtcctgaaggctggagctcactttggattggt tactcctttgtcatgcacaccagtgctggtgcggagggctctggccaggccctggcatcc cctggctcctgcctggaggagttccgcagcgctcccttcattgaatgccatggccggggc acctgcaattactatgcaaatgcttacagcttctggcttgccactatagaaaggaatgag atgttcaggaaaccgactccctcaaccttgaaagccggggatctacgctcaaatgttagc cgttgtcaagtctgtatgagaaaaacataa

DBGET integrated database retrieval system