Serinus canaria (common canary): 103812587
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Entry
103812587 CDS
T05755
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103812587 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scan01009
]
103812587 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scan04515
]
103812587 (PCDH20)
Protein phosphatases and associated proteins [BR:
scan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103812587 (PCDH20)
Cell adhesion molecules [BR:
scan04515
]
Cadherins
Protocadherins
103812587 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
103812587
NCBI-ProteinID:
XP_030090953
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MLQMQHSLLEVEVXEAVGGGIASPSLHPYASLSXHLLLFLLFVGPFNCFASYSRATELFY
SLNEGLPAGVLIGSLARDLRLPTAGGQQAASLQPPLSFTLASHGLGGQYVQLDNRSGELH
TSAVEIDRETLCVESSGATIFGGSAAVSSSSPSPESCLLLLDVLVLPQEYFRLVKVKIAI
RDVNDNAPRFPVPHIRLSVPENAPVNTRLAIEHPALDPDMGTNGVQTYRLRDNYGVFTLD
VEENENGERTPYLIVMGALDRETQDEYVTVIVAEDGGTPPLVGSATLTIGISDINDNCPQ
FNESQLNVTLYGNSSLGTHVATVHAVDMDLGSNAQITYSYSQKVPQPSRDLFHLNESTGT
ITLSTKVDGDTPRLHRLIILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEVEGVV
YLKELEPINTPIAFFTIKDPDEKYKVSCYLDGDGPFRLSPYKPYNNEYLLETTKPLDFET
QQLYEISVIAWNSEGFHVKKVVKIQVLDDNDNSPVFSEQLIELSIEENNVPNAFLTKLHA
TDADSGERGQVSYFLGPDAPSYFALDKNTGVLTVSTQLDREEKEKYRYTVKAVDSGFPPR
ESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVL
NGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNP
PLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDP
KTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRK
EPDISVEEKQPQISIEPTHKKMESASCMPTLVALSIISLGSIALVTGMGIYICLRKGKKH
HRADENLEVQIPLNGRINLHMLEKKPVEISNI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagatgcagcactcgctgctcgaagtggaagtgngggaggcagtgggcggggga
attgccagcccttccttacacccctatgcttctctttcttagcacttgctcctcttcctg
ctcttcgttgggcctttcaactgctttgccagttacagccgcgccactgagctcttctac
agcctcaacgaggggctgcctgctggggtgctcatcggcagcctggcccgtgacctgcgg
ctcccaacggctggtggccagcaagctgcatctctgcagcccccactctccttcaccctg
gcctcccatggcttgggcggacagtatgtgcagctggacaaccgctctggagagctgcac
acctcagcggtggagatagaccgggaaactctatgcgtggaaagcagtggggccaccatc
ttcgggggatcggctgctgtctcctcttcctccccttcgccagagtcatgcctactgctg
ctggatgtgctggtactgccacaggagtactttcgcctggtgaaggtaaaaattgctatc
cgtgatgtcaacgacaacgctccccgcttccctgtgccccacatccgcctctcggtgcct
gagaatgcgcctgtgaacacccgcctggctatcgagcaccccgcccttgaccctgacatg
ggcaccaatggtgtccagacctaccgcctgcgagataactacggggtcttcaccctggat
gtggaggagaatgagaatggggagaggactccctacctgattgttatgggggcactggac
agggagacacaggacgagtatgtgacagtcatcgtcgctgaggatggggggactcctcca
ctcgtgggcagcgccaccctcactattggcatcagtgacatcaatgacaactgcccccag
ttcaatgaatcgcagctcaacgtcactctctatgggaattccagcctagggacacacgtg
gctactgtgcacgcggtggacatggaccttggatccaatgcccagatcacctactcctac
agccagaaggtcccccagccatccagagacttgttccatctgaacgaaagcacaggaacg
atcacactctccactaaagttgatggggacactccaaggctgcacaggctgatcatactg
ggcaacggtcctggctgtattcctgctgtgattacggtgctggtgaccatcatcaaagtc
atgatgaggccccctgaagttgttcctcgtttcatagctaatgaagtggaaggggtggtc
tacttaaaggaacttgagcctatcaacacccccatagcattttttaccatcaaagaccct
gatgaaaaatacaaagtcagttgctatttggatggtgatgggcctttcagactttcaccg
tacaagccatacaacaatgaatacctgttggagaccacgaagcctttggactttgagaca
cagcagctgtatgaaatctctgtaattgcgtggaactctgaaggatttcatgtcaagaaa
gttgtcaaaatacaggttctggatgacaatgacaattcaccagttttctctgaacagctg
atagaattgtccattgaggagaacaatgtccccaatgcttttttgaccaaactgcatgct
actgatgctgacagcggagaaagagggcaagtgtcctatttcttaggtcctgatgcccct
tcctattttgctttagataaaaacacaggagttcttacagtttccacccaactggacaga
gaagaaaaagagaaataccgatacactgtcaaagcagtagattctggattccctccaaga
gaatcaatagcaactgtcaccatcactgtattggataaaaatgacaacagtccaagattt
atcaataaggatttcagcttttttgtgccagaaaactttccaggttttggtgaaattgga
gttataagtgtcacagatgctgatgcagggcaaaatggatgggttgccctttcagttctg
aacggaagtgatatttttgttatagatactggaaaaggagttttgagagctaaagtctcc
ctggacagggagcagcaaagctcctacgttctgtggattgaagcagttgatggcggtgat
cctgccctatcttctacagcaaaaataactatccttcttttggacataaatgacaaccct
cctttggtcctgttccctcagtctaatatgtcgtacttgctagtccttccttctaccctt
cctggctctcccatcactgaggtctatgctgtcgataaggacacgggcatgaatgcagtc
atagcttacagtatcataggaagaagaggccctcgacccgagtcattcaggattgacccc
aaaactggaaatatcaccttggaagagtccctgatgcagaatgactatggcctctatcgg
ctgcttgtaaaagttagtgatcacggctacccagagcctctccattccactgtcatggtg
aacctttttgtcaatgataccgtcagcaatgagagctacattgaaagcttgttaaggaag
gagcctgatatcagtgtagaagaaaagcagccacaaatatccatagagcctacacataaa
aaaatggagtcagcatcctgcatgcctaccttggtagctctttccataataagcttgggt
tcaattgctttagtaacggggatgggaatttacatttgtctaagaaaagggaaaaagcat
cacagagcagatgaaaacttggaagtacaaatcccattaaatggaagaatcaacctgcac
atgttggagaaaaaaccagtggagatttctaacatttga
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