Serinus canaria (common canary): 103812664
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Entry
103812664 CDS
T05755
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04382
Cornified envelope formation
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103812664 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103812664 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103812664 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103812664 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103812664 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103812664 (COL4A2)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103812664 (COL4A2)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103812664 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103812664
NCBI-ProteinID:
XP_018764541
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDAGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGIIGFPGPPGTLGIQGPIGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELTGVPPDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGITGFPGLSGERGIPGYDGAPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGVSGLPGDRGDEGDRGLPGPPGFSDADGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGIRGPPGPIGAPGPLFGLKGREGTPGRYGIQGFPGPRGQKGPKGEE
GDCTRCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGFPGAKGYSGPAG
FPGRKGEKGDSLHVTTKGTKGIRGDPGLPGIRGGDGLPGKDGLDGLPGQPGLPGDAIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQGQAGSPGSAGLPGLPGEPGQV
DCGQVIEDFPRGDATEPIWSGAGCVRPPKGSQGRPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGLPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGVPGPKGLPGDVF
GAAAGARGDVGLPGFPGLKGAPGDQGVPGTRGADGSPGLPGPKGDPGPQGLPGLMGLPGT
PGAHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGPQGD
KGSQGARGFKGDRGDQGPPGDPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
ISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTPGLAGQKGAPGWPGLPGQAGQPGFRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGERGVPGVP
GSFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGET
GRAGEIGPKGSRGDPGLSGSPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGPAPDLPRLVAEQGSPGPRGNIGPQGSPGDMGPQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagtgcacgtattttcctttgtcaggatacggggcttttg
ttgatcctgatggaagttgtgttgtcagccgtcaaagtggacgctggtggaaagaaatac
acagggccatgtggcggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagcctggaccaagggggaaaccaggtcatgatggctgtaat
gggacagcaggtgaccctggtgacgcgggaactcctggattctctggtttccctggtagc
attggagtccaagggcccaagggccagaagggagagccgtacatagtagcgccggagatc
atcagccgacacaggggagatcctggggattcagggatcattggttttcctggacctccg
ggtacactgggtattcaaggacctattggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacagaggccttggcttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccacctgggcttcctacaagagaactg
acaggtgtcccccctgacaagcacaagggtgaaagaggagaccctggaccaagaggggaa
gctggaattccaggtgttcttctctttcctctcgaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcatcactggtttcccaggacttagtggagaaaga
ggtattccaggatatgatggtgcacccggtggccatggtcccagaggaagcaagggggag
cctggcgagatgggtcctccggggccagattcctattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggcttcccaggtgtttctggactcccaggagatagaggagat
gagggagatcgtggattgcctggtcctcctggattttctgatgcggatggggataagcca
ggcttgcctggagaaatgggaccaaaaggtgaaaagggtgaaattggatctcctgcttat
tttgcgggaccgcctgggcttccaggcaaggatggctcacctggaattcgtggtccgcct
ggtcccattggagcccctggtcctctctttggattaaaaggacgagagggaacaccaggt
agatatggtatacaaggttttcctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcactagatgccttttgggtgaggagctcagaaggggctctactggcccccgt
ggccctcctggctttccaggaacccctggccagcctggaaggaaaggagaacctggtgat
cagggaccacatggtcttcctggcttccctggagcaaaaggatattcgggtccagctgga
tttcctgggcggaaaggagaaaagggagactctctacatgtaactacaaaaggcaccaaa
gggatccgaggagaccctgggctgcctggaatcagaggtggagatggtttgccaggcaaa
gatggattggatggtttaccaggacagcctggccttccgggtgatgctatcagaggattc
cctggtgatcctggttatccaggtgaattaggcccaaagggctttccaggagaagcaggc
ctgccaggtgaaggatttcctggtccaaaaggcttccggggtcctccaggtgaccaagga
caagctggaagcccaggatctgcaggtctgcctggtctgccaggagagcctggccaagta
gactgtggacaggtcattgaagactttcctagaggagatgcaactgaaccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaggccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggactcccaggtcctccaggtttcact
ggacccaggggagacagaggccccaatgggctacctggactgcagggacacccaggcctt
acaggaaaatctggagctccaggagtaccaggaccaaagggccttcctggtgatgttttt
ggagcagcagcaggggcccgaggggatgtcggcctccctggctttccagggctgaaaggt
gcaccaggagatcaaggagtaccaggaaccagaggagcggatggtagcccaggtttgcca
ggacccaaaggagatccagggccacagggtctccctggtttgatgggattaccaggaaca
ccaggagcacatggattcccaggaccaccaggaaaccgtgggccagatggtggccctggc
tctcaaggacctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtgggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggactg
ccgggtatacgtggtgtgactggtccccctggcataagtggaatggatggctttccagga
gataaaggcttgaaaggttcacctggcattgatggtttcaaaggcatgacaggcctgaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggccctcttgggcctcagggagat
aaaggctcacagggtgcacgtggctttaaaggtgaccgtggggatcaaggccccccagga
gaccctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacaaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cctggaaagacaggaaccccagggtcccctgggcatcccagctacgtggctggtgtgaaa
ggagacatcggcgcaaaagggctgacaggtgtgaaagggtatcctggtcctgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcattccagga
atttcaggccactttggtactcctggctcacatggagaaataggtgatcggggagatact
ataaacttaccaggaatgccaggtctgaaaggggaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggcctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggacccccagggcagcaaggaaaccctgggactcctggacttgcaggtcaaaaggga
gctcctggctggcctggcttaccaggacaagcaggccagcctggcttcaggggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgcagtgggtgacaaaggagaagcaggagagccaagcaga
gtagaaggcagccgaggacctccaggccagaagggagagagaggtgttccaggagtccca
ggatcctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagtgccaggctatccagga
ccacaggggcagcctggaatacctgctcctccaggaagcaaaggagaaagtggagaaaca
ggtagggctggagaaattggcccaaaaggaagtagaggtgatcctggattatcaggaagt
cctggcctgcctggattccctggaccaaaaggtcctaggggtgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgacctgggacccatcggacccaagggggataga
ggagtaacgggcttccagggacctccaggctctcctgggccagcccctgatcttccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcaaggaagccca
ggagatatgggacctcagggcccaccaggagatccaggtttcagaggctcgcctggagag
ccaggactccagggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggatttgaaggccagccaggccgccctggtagccct
ggccccccaggcatgccgggtcgcagtgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagcccatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaaggacaagagaaggcacacaaccaggatctagggctggctggatca
tgtttgtctcgctttagcaccatgccattcctctactgtaaccctggggatatttgctac
tatgcaagtcgaaatgataaatcctactggctctcaactacagcccctctcccaatgatg
ccagtggcagaagaagacattaagccatacatcagtcgctgctcggtgtgcgaggcccca
gctgtggcaatcgctgtccacagccaagaagcttcgattccccactgccccgagggctgg
cgcagcttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcttggaagatttcagggcgactcctttcatc
gaatgcaacggcgcccgcggaacctgtcactactttgcgaacaaatacagcttctggctg
accaccatcgaccagcccttccaaagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttatag
DBGET
integrated database retrieval system
