Serinus canaria (common canary): 103812821
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Entry
103812821 CDS
T05755
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103812821 (VPS50)
Membrane trafficking [BR:
scan04131
]
Protein recycling
Others
EARP complex
103812821 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EF-G-binding_N
Motif
Other DBs
NCBI-GeneID:
103812821
NCBI-ProteinID:
XP_009084204
UniProt:
A0A8C9NBD2
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIENLRIPTKEELRELHEEPPDPQAQQEIINSIEEV
YFSSDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFEINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAVSSTVTLFEQYCAGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKKSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLDVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTANELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DTDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaacttacggattcctactaaggaggagctcagagaacta
catgaagaaccacctgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccagtgactcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaagctaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgtcacatcattgcagagtggccttcagctagcagcggttatttgcacaaatggaaga
agacacctgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacagttgctaattggactgctgaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttagaggaagaggattacccaggagctatt
caactatgtttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattggatgtagct
ctttccaaaatatgcaagaattttgaaatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcgggaaacaca
gacaccaagttccagaagttacagtacaaagacctctgtacacacatcacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgattggaactgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggagcatgggctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcgcgttccccgtcggtg
tcgccgagtaagcagccggcctccgcggtctcatcgacggtgacgctgtttgagcagtac
tgcgccgggggaaaccccttcgagattcaggccgacagcaaggatgatgagacagaagat
gtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccaataaaaagtgtttctcgagaaactctgaggagcagaaagaaatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaagcctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggattgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggatgtgtctgctgatccttcagggactctcaca
gctgctgaagagagaaaagagaaggttccaagcccacatctcagtcatcttgtagttttg
acatctggcaattcgctgtatggcttggcagagagagtggtggccacggaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccaatgaattacgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgcttctcctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagat
gctcttttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtc
cgtattccattgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcagcagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gagtcctggataaaagaacatagggaatattccactaagcagctgaccaatctcgtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacacagacaggcctaagagataa
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