Serinus canaria (common canary): 103812849
Help
Entry
103812849 CDS
T05755
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103812849 (TRPA1)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103812849 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103812849
NCBI-ProteinID:
XP_009084256
UniProt:
A0A8C9KZ79
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MKRSLLWLCRSREKAASSSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIMDDSSYEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKVLVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALILLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSVVILHKRWEEAVVTFSHSSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKIKDGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSNELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSAEKTNGFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgtggctctgccgctcccgggagaaggcggcctcctccagcgcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgtcgcctcgcaggatgtcttcaag
gtcatttcagatggaagtgcctgtaggctccggagcttcattaagaagaatcgttctggg
cttacaaaagtggatgaattaaatgccaccccactgcatcatgctgctgaaggaggacaa
atagaactcatgcagttgatcatggatgattcttcctatgaagtattaaatgtgatggat
tcttctggaaatacccccctgcactgggccacaaagaaaaaccaggttgaaagcgttcgc
ttgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcccctttg
cacatggcagttcagtccctgcacaatgaaattgtgaaggttttagtccagcatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctataattgtagcgtgttacaag
gacaatcctgaagcactgatactcctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacaggatgtatgcccatccatgcagcagcattttcaggtgcaaaaacatgtatggaa
attcttttgaaaaaaggtgaagagttgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtccacttcatttggcagttcagagtggtgacctcgaaatgatt
aaaatgtgcattgaatttggagctcaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcgacagagattgtaaaactaatgatgtcatcctat
gctggggaggagtccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagccctgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccgcttctgctggccacttcctgtgcatcatgg
aaaattgtgaatttactgctttcaaaaggagcaaatgtgtcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtgttgcagcctggaggattacagcatctgaatgagaaa
tatctgcagatggaacatattaaaaatcttgtagtggatgaagataatgaaggatgcact
ccattgcattatgcttgcagacaaggtgtggccctctctgtcaataatttactcagcctc
aatgtttccatctactctaagagcagggacaagaagtcaccattacactttgctgccagc
tatgggcgcatcaatacttgtcagcgacttatcagagacatgaaagacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcacttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagagaggggctctcttcctctgtgattataaaggctgg
acagccctgcaccatgctgccttcggaggatacactcgcaccatgcagataattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacttggct
gcacgagaaggacatgcaaaagcagtgaggttacttcttgactatggtgcaaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggaggaaagatgtg
gtgtctgttgtcattttgcacaaaagatgggaagaagctgttgtgactttctctcactct
tccagtgccaataagtgtcctttgttggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataattgagtcttcagaggaaaagacaagtcgagatttctat
attgaatacaacttcagatatcttcagtgtcccttgacacttaacaagaaaataaaggat
ggtgaagatattttctatgaaccacttactactttaaatgccatggtgcgccacaatcgc
atggagcttctcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
gggtttcgagcacatttaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttaaatggaacagagctctatgaagca
agaccattagaatacgaggactcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctactggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgtg
tacttgtcttggatgaacttcttgctttatcttcaaagatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcctttgggctgagtttctttgtccttttgggttcacagcaaacctacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattcctggatcctttgctaagcaatgaattgccatatccattcctgagttacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggtgatattgctgaagtacaaaaatatgctgcactcaaaaggattgcaatgcag
gttaatctccacaccaacttggagaagaagctgccattttggttcttaagtcgggtggac
caggagtcaatcactgtgtatcccaacaggccgagatactgtggatttatgagcgtgttc
cagtattgctttgggtgtgaggactctaccacatatgcacagagccctgatacaacacta
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaaaatggagatagtatcagaggctgaggat
gaagacagcaatgatttatttcagcacaagtttaggaaaaggcagttagagcacaagaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaacccaagcgcagaa
aagaccaatggcttcttctag
DBGET
integrated database retrieval system
