Serinus canaria (common canary): 103812959
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Entry
103812959 CDS
T05755
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04621
NOD-like receptor signaling pathway
scan05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103812959 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103812959 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scan04054
]
103812959 (NOD1)
Pattern recognition receptors [BR:
scan04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103812959 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_16
FumaraseC_C
NPHP3_N
AAA_22
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
103812959
NCBI-ProteinID:
XP_009084409
UniProt:
A0A8C9ME71
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MEGQLCANVDISVKSPPGASPQSFIALLKVHRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFVYVLQKVTDAYYELQPWLDEIGYEPSENI
CSKPVVNTDPVSRYCQKLRHELGRDSKFFMLYAQKEEVLLEEIYSNSIMELVSFTNESLG
HVGRLEALFDDAVGLINEDGETVYVYGDAGIGKSILLQKIQSLWARKELNIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPAEVFHHILQFPHTVLFTFDGFDEIYSSFDL
SSVPEVCSPNEPIHPLALLVSLLRGKLLKGSKKILTARTGTEIQKNIIRKKVVLRGFSRN
NLKEYTAMFFKDEQQRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSSQWFDGHEL
PDSSVTLTDVFLLMIEVHLNRSVKTNLLKSNIRSQAEVFKSRKESLLALGKMAYKGMENS
SFIFEQEEVSLANISEDDLQLGFLRTVKGYSGCDSQATYEFLHLTLQSFFTALFLVMEEK
VGTKELLEFFNECSSMETAQPTCLRIPWLKKQLAGEDPFQNKEHCNFTNMFLCGLLSGSR
QKLFRHLVSPAVLKRKRKTLITYLGESMKSRLKGYTRSRLKSYNQVQMQPNFVWMLRCLY
ETQSEKVGRMAARRMHANYIKLAYCNACSADCSAISFLLHHFQKHLALDLDNNNINDYGI
KQLQPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLI
EECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRDHP
RLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVH
LWLIQNQITAKGVKCLSEALKENTTIQEICLNGNLISQEEAKAFENEERIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaatgtggacatttctgtgaaaagtcctccaggagcaagc
cctcagtccttcattgctttgctgaaggttcaccgagagcttctggtcagtaggatccga
aacacacagtgcttgattgataacttgattaagaacgactacttctccactgaggatgca
gagatcgttgtccagtttcctactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaagtttcagaatatttcgtctatgtcctgcagaaagtcactgat
gcttactatgagcttcagccttggctggatgaaataggttatgagccttcagagaatatc
tgtagtaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagttttttatgttgtacgctcagaaggaggaggtgctgctt
gaagaaatctactccaacagcattatggagctggtcagttttaccaatgagagtcttggt
cacgtgggtcggttagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactgtttatgtctacggtgatgcaggaattggaaaatccatcttgctgcaaaagata
caaagcctttgggccaggaaggaactgaacataggggccaagtttttcttccgttttcgt
tgtaggatgtttagctgcttcaaggaagatgaagccatatgtttgaaagacctgctcttc
aaatataattgctacccagaccaggaccctgcagaagtgttccatcacatcttgcagttc
cctcatacagttctattcacttttgatggctttgatgagatctattccagctttgatctc
agcagtgtacctgaagtatgctcacccaatgaacccatccaccccctggcactgctcgta
agccttcttagaggaaagcttcttaaggggtccaagaaaattcttaccgccaggacagga
actgagatccaaaaaaacatcattaggaagaaagtggtgctccgcggtttctccaggaac
aacttgaaggaatacacagctatgtttttcaaagacgagcagcaaagagcactggtgtca
aaccagctggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcacttccactccagccagtggtttgatggccacgagctt
ccagacagttctgttacattaacagatgtatttttgctcatgattgaagtacacctgaat
cgatctgtgaaaacaaatttgctgaagagcaatatcaggagccaagcagaggtgttcaaa
tcaagaaaggaaagtcttctagctttgggtaaaatggcatacaaagggatggagaactct
tcctttatctttgagcaggaggaagtctcattggcaaacatctctgaagatgatttgcaa
ttgggctttctcaggacagttaaaggttacagtggctgtgacagtcaggccacttatgag
ttcttgcacttaacccttcagtcttttttcacagctttgtttttggttatggaggagaag
gtgggtaccaaggagttacttgagtttttcaatgaatgttcttccatggagactgcccag
cctacttgccttcgtatcccctggctgaagaaacaactagcaggggaggatcctttccaa
aataaagaacactgtaattttaccaacatgtttctttgtggcctgctttctggatccagg
cagaagctcttcagacatttagtttcgcctgcggtccttaagaggaagagaaaaacactc
atcacataccttggggagagcatgaaatcccgcctgaaaggctacactcggtccaggctg
aaaagctacaatcaggtgcagatgcagcccaactttgtgtggatgctgaggtgcctgtac
gagacgcagagtgagaaggtggggaggatggcagcccgccgcatgcacgccaactacatc
aagctggcctactgcaacgcctgctctgccgactgcagcgccatttccttccttctgcac
cacttccaaaagcacctggctctggatttggacaacaacaacatcaatgactacggaata
aagcagctgcaaccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtc
acagatcatggtgtaaggatcttgtatgaagaactctccaagtaccaaattgtgtctttc
ttgggcttatacaacaaccaaatcactgatgttggagccaaatatgttgcaaaattaatt
gaagagtgttcaagcctggaatatgttaaaataggagcaaacaaaataacgagcgaagga
gggaagtgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtgg
ggtaatcaagttggagacgaaggagcaaaggcatttgcagaggccctgagggaccacccc
aggttaacaaacgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagtatt
gctgaagccatgcagcacaacaactccgtgaggatattctggttgactaaaaacgagctg
gatgatgaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcat
ttatggcttatccagaatcaaattacagccaaaggggtgaagtgcctcagcgaagctctc
aaggagaacacaactattcaagaaatctgcttgaatgggaacctgataagccaagaagag
gccaaagcttttgaaaatgaagagcggatcatttgcttttga
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integrated database retrieval system
