Serinus canaria (common canary): 103813019
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Entry
103813019 CDS
T05755
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
scan
Serinus canaria (common canary)
Pathway
scan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103813019 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103813019 (SMARCC1)
03036 Chromosome and associated proteins [BR:
scan03036
]
103813019 (SMARCC1)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103813019 (SMARCC1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103813019 (SMARCC1)
PBAF complex
103813019 (SMARCC1)
GBAF(ncBAF) complex
103813019 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
103813019
NCBI-ProteinID:
XP_030087109
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSVDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHASEIEAEIEDAPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSLDAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGXPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENPDASLGPLAYQPAPFSQSGNPVMSTVAFLASCGDPRV
ASAAANAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPEEP
EKMDGAEEEKMETEAEGQPAEKVESKAESEPEEGEKVPEGESERNADKEPESDGAAEPKA
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGPGINPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQLPGSLLPGQPMPGRMMPGSIHGGGGAAPPGMAPMAGNLLGPRVPLAAPNGMYPGP
AQPAPPAEGVTPPPAGAPPASAAP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatacaag
aatgagcagggctggaggaggtttgacctgcagaatccctcccggatggaccggaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaag
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccacgtgtatcccagt
cctacctcagtggatgatgatgagtggttgaggcctgtgatgaaaaaggacaagcaggtg
ctggtacactggggcttttttccagacagctacgacacctgggtccatgccagcgagatc
gaggcagaaatcgaggacgcgcccatccccgagaagccctggaaggttcatgccaagtgg
attctggacacggatgtgttcaatgagtggatgaatgaggaggattatgaggtggatgag
aacaggaaatccgtcagcttccgccagaggatctccatgaagaatgaggagcccgtgagg
agccccgagaggagggacaggaaagcagcagccagcacaaggaagaggaaacactcccct
tctcctccccccactcctgtggagtccaggaaaaagacagggaagaaaggacaagcagct
ctctatggcaaaaggagggggcagaaggaagaggatgagcaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggagacagtggcgactggaggaaaggaggatgaggaccccaacaagggtgac
cagagccgctctctggacgcgggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgcatccacgtgattgaacgccgtgca
cttccagagttcttcaatggcaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccggctgaacccgcaggagtacctgaccagcactgcc
tgcaggaggaacctcaccggggacgtctgcgccgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggaccctgagagccgccccatggccatggggncc
cccccgaccccccacttcaacgtgctggccgacaccccctcggggctgatgccactgcac
atccgcaccccgcaggttccagctgcccagcagatgctgagcttccctgagaaaaacaag
gagaagccaactgacctgcagaactttggccttcgtacagacatctactccaaaaagact
ctggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctgttggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccctac
ctggagaacccggacgcctccctggggcccctggcctaccagcccgcgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctcctgtggtgatccgcgcgtg
gcctcggccgccgccaatgcagctctggaggagttctcccgggtcagagaggaggtgccc
ctggagctggtggaggcccacgtgaagaaggtgcaggaagcagctcgagcctcagggaag
gtggatcccacctacgggctggagagcagctgcatcgctggcaccggccccgaggagccc
gagaagatggatggagctgaggaagagaagatggaaactgaggcagaggggcagccagca
gagaaggtggagagcaaagccgagagcgagcccgaggagggggagaaggttccggaaggg
gagagcgagcggaacgcggacaaggagcccgagagcgacggggctgcagagcccaaggca
gaggaaaaggaggcagaggagaacaaggagaacgttgatggcagcaaggacaaagaagct
gaggctgggaagaagaaagtggagcacgagatctcggaaggaaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaagccaagcacctggcagctgtggaggagagg
aagatcaagtccctggtggcccttctggtggagactcagatgaagaagctggagataaaa
cttcgccactttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag
cagaggcagcagctgctgacagagaggcagaacttccacatggagcagctcaagtacgcc
gagttaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcgggcctggcatcaaccccctgggggcaccagcacacccagggctgctg
ccccaccagcagcccccaccctaccccatgatgcaccaccagatgccacctcctcaccca
cctcagccaggccagctgcccggctccctgctgccgggccagcccatgccaggccggatg
atgccgggcagcatccacggcgggggcggggcggccccgcccgggatggccccgatggcc
gggaaccttctggggccacgtgtgccgctggctgcccccaacgggatgtatcccggcccg
gctcagcctgctccgcccgccgaaggagtgaccccacccccggccggagccccgccggcc
tcagccgctccctag
DBGET
integrated database retrieval system
