Serinus canaria (common canary): 103813078
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Entry
103813078 CDS
T05755
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103813078 (ZEB1)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
103813078 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
103813078
NCBI-ProteinID:
XP_030093124
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREASTNTCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPESPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPADSD
DQAATSNVSEPQNSTNNSQNPVSTTKSQTLPGASALNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQSQANGNQDERQDTSSEGISNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREPEERDSAEPEELGPEALSSEHVVVRASPSQ
IDSDERESLTREEEEYSEKEEEEEEEKDIEGLQEEKECRELQEVGDDAVGDAVGDAVGDA
EEVAAVEEEEGKTEGDKNDEAVNQASNAEPEVIQNNGQVSEENNE
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaagcaaactcagactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacggaccatatagtgttaccagaaaacagtgagagagaagccagtacaaac
acttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagagaatgag
caaaaccatgaccctaatgttgaagaattcctccaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagaggcaaggcacaccagaagctagtggtcaggacgaa
aatggaacacctgacgccttttcccagctgctcacgtgcccgtactgcgaccgagggtac
aagcgtttcacctctctgaaggaacacatcaaataccgccatgaaaagaacgaagataac
ttcagctgctccttgtgcagttacacatttgcgtacagaacgcagctcgaccgccacatg
acatcacacaaatcaggaagagacccaagacatgtgacgcagtccagtggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcaaaatggggtttttagtggtggtagc
ccgttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaacgtaataaggcaagtactggaaaacaatcatgctaatcttgcatccaaa
gaacaagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgagaaattaccacaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacccgagtcccctgtcccatcagaaaccggggag
aacaacttgtctcctggtcagccacctttaaagaaccttctgtcgctcctaaaagcgtat
tatgcattaaatgcacaaccaagtgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacagatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagccccgcagacagcgat
gatcaagcagcaacttcaaatgtgagcgaaccccagaacagcacaaataactcacaaaat
cctgtcagtacaacgaaatctcaaactttaccaggggcttcagctctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaggaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttagtcctgcagttcatgagacaccaccaaaa
cagagccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatcc
aatttagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacgaaa
gcatttaaacacaaacaccatttgatcgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcgggctcttactctcagcacatg
aaccatcgctactcctactgcaaaagggagccggaggagcgcgacagcgccgagcccgag
gagctgggccccgaggcgctgagcagcgagcacgtggtggtcagggcgtccccctcgcag
atcgactcggatgagagggagagcctaaccagggaagaggaggaatacagtgaaaaagag
gaagaggaggaggaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgatgcagtaggggatgcagtaggggatgcagtaggggatgca
gaagaagtagcagcagtagaagaggaagaagggaaaactgaaggtgacaagaacgatgaa
gctgtaaatcaagcaagcaatgcagaaccagaagttatacaaaataatgggcaggtgtca
gaagaaaataatgaataa
DBGET
integrated database retrieval system
