Serinus canaria (common canary): 103813842 Help Entry 103813842         CDS       T05755                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism scan  Serinus canaria (common canary) Pathway scan04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:scan00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103813842 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen UbiA Motif Other DBs NCBI-GeneID:  103813842 NCBI-ProteinID:  XP_018766177 LinkDB All DBs Position Unknown AA seq 1516 aa AA seqDB search MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHG SSYVTSSGSGRLNSTSSSSSYRQAQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSS PEFPRKDFSASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTR SPSGTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNS SSLINAMSHSTGSVFGVPNNLAPSNHTLNAGLSSSSTVFGVQNNLSPSSSSATQNATAAS ASQQQTYAMKNTSQSNTMASTGVSASAGGTVLSSQGDDILLKDCKFLLLEKEKAPAKEME LLVMTKDTGKVFSASNTGLSGGSFGEDTLKKEKQGFSSSYATDTGLKSDANGGLKSMPKR DKETYAEIQSGDAGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEV RKLKSRVEDLEKINGGLLAINQGNSKIEKDVSRVDFLHGNSLSSTFPYENEESVWLMVKS RLNKEIERGYFRGERGERGEKGDMGIQGPKGDRGLPGVPGIPGPIGHAGPEGPKGQKGSM GDPGMEGPMGQRGREGIPGPRGEPGPPGFGEKGDRGAVGEPGPPGPPGPPGSTGLKGLMG SPGPQGPPGPPGLQGFRGEAGLPGAKGEKGASGPPGPKGDQGEKGSRGMTGEQGSRGIPG PPGEPGAKGPAGQAGRDGQPGEKGEPGLMGMPGARGPPGPTGDAGEPGLTGPQGPPGLPG NPGRPGAKGEPGAPGRVISAEGSSTITLPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQG PRGEKGSPGEAVIETIRTEVSSLASQMLGDLQGRAGPPGPPGPPGESVQGPPGPRGPPGE GLPGPPGPPGRPGSSMSTSEAFFTGPPGPPGPPGPKGDQGERGPRGFTGEPGDPGLSAFS SHGERVTIQGPPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPSG GSSQEIQQYVTDYLKSDNVRHYFTGAQGPPGPPGPPGLITTADGMTLDYAELATRVMSYM TSSSGRYESFSSSVSTTSILYQELLDLLQREEIRQYLIGPQGPPGPPGPGGDGMSLSLDY DELTRRFISYLSSSGMSIGLPGPPGPPGSPGISYSDLTAYLRNSEFSGVVGPPGPAGPPG PPGIPGSPGTSLEDFSAYLQNVGYSSLSGVRGPPGPPGPPGPPGFSGTGLLSYADITNSD EFRSELIQYLKSDEVRSYISGPPGPPGPPGPKGDSGFVSGSMSSSYQGLRASEHLHGGSL GAEGSHGGSLGTGSSYGSSMSSRSSYHTSVGSDGAYDASMGTAGSFDGLLTEEESHRSSA GSSRSYSNSFTGSLDYNELALRVSESLQSRGILQDLMSYTAQGPAGPPGPPGPPGISKVF AAYGNVTADLMDFFRTHGAIQGPPGEKGERGYRGPKGDPGPMGPPGRHGHRGPKGEKGEK GEQLYVGRRKRRAVGV NT seq 4551 nt NT seq  +upstreamnt  +downstreamnt atggattcggtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacttatt acagagactgtaaccacaagactcacatccttgccacccaaaggagggagcagcagtggg ctcaaaacatcatcccacactggagggagtggagtggaaaagcggtcgtacactcatgga agcagctatgtgacctcaagtggaagtggtagattgaattcaacatcatcatcctccagc tacagacaagcccagtctcccagctctactctcaccaaatcacctggctcaacatttgaa agaaaaacctatgtcaaccgccatgcaacatatgaagggagctccagtgccaactcttct cctgagtttcccagaaaagatttttctgcatctgcctctaccagagggagaagccaaagt cgagagagtgaaatacgagtccgactgcagagcgcatctccctctggcagatggacggag ttggatgatgtgaaacgtttgctgaaaggaagtcgatctgccagctgcagccctactcgg tcaccatccggtaccctcccgataccgaaaaaggccgtggtggagacgaagatggtcact gagagctctcagtcagtgtcagggacatatgacacaaccatactgaatactgccctccct tcatacatgtggtcttccactctgcctgctgggtcttcccttggtggataccataacagc tcttccttgatcaatgccatgtctcactctacaggatcagtttttggtgtcccaaataac ctggctcccagcaatcatactctgaatgcgggcctgagctcttcctctacagtatttgga gttcaaaacaacctgtctccaagctcttcttctgcaacccagaatgctacagcagcctct gcaagtcagcaacaaacatatgcgatgaagaacacatctcagagcaacaccatggcaagt actggtgtgtctgcctcagcaggaggaactgtcttgagctcccagggagacgacattctg ctcaaagactgcaagttcctgctgctcgagaaggagaaggcaccagcaaaggagatggaa ctcttggtcatgacaaaggacactggcaaagtcttcagtgcttctaacactgggcttagt ggaggatcttttggagaagacaccttgaagaaagagaagcagggattttcctcctcttat gctacagatactggcctaaaatcagatgcaaatggagggctgaaatccatgccaaaacgg gacaaagaaacttatgcagaaatacaaagtggtgatgcaggaggtgcaattggatcagca ccatcctggtgtccttgtggttcctgctgtagctggtggaaatggctcttgggtttgctt ctagcctggttgtttctccttggattgctttttggactcattgctctggctgaagaagtg agaaagctgaaatctcgtgtggaagacctggagaaaatcaatggtggcctcctagcaatt aaccaagggaattcaaaaatagaaaaggatgtttcaagagtagactttcttcatggtaac tcactctcctcaaccttcccatatgaaaatgaagagtcagtctggttgatggtgaagagc agactgaataaggaaatagaacgaggctacttccgaggggagagaggagaacgtggtgag aaaggtgacatgggaatacaaggtcccaaaggtgatcgaggacttcctggtgtcccaggc attcctggtccaattgggcatgcaggaccagaaggaccaaaaggccagaaaggaagcatg ggtgatcctggcatggaaggtcccatgggacaaagaggtagagaagggataccagggcct cgaggggagccaggaccacctggatttggagaaaaaggagacagaggtgctgttggtgag ccaggtcctccagggccacctggacccccaggttctactggcctaaaaggtctgatgggt tccccaggcccacaaggtcctccaggtcctcctggcctacaaggatttagaggtgaagca ggactcccaggtgctaaaggtgaaaaaggagccagtggaccccctggacccaaaggtgat cagggtgagaagggttctcgtggaatgacaggtgagcaaggctcaagaggaatacctgga cctccaggagagccaggggctaaaggacctgcaggacaagctggtcgtgatggacagcca ggtgaaaaaggtgaaccaggtcttatgggaatgccaggtgccagaggccctccaggaccc actggagatgctggagagccaggtcttacaggaccccaaggaccgccagggcttccaggc aacccaggccgaccaggggctaaaggagaacctggagctccaggaagagtcataagtgca gagggttcatcaactattactctcccaggcccaccagggcccccaggcccacctggcccc actggtcctccaggtgttccaggtcctgttggaccagctggtctccctggacagcaaggt ccacggggtgagaaaggatccccaggtgaagctgtgatagaaaccataagaacagaagtc tcatcattagcatctcaaatgctgggagatttacaagggcgagcaggaccaccaggtccc cctggaccaccaggtgaatctgtgcaaggaccccctggacctcgtggtcccccaggagaa ggattgccaggtcctccaggcccaccagggagaccaggatcatccatgtccacctcagaa gcattcttcacaggcccaccaggtccaccaggaccaccaggcccaaagggagaccaaggt gaaagaggtccacggggattcacaggagaacccggtgatcctggcctttcagcattctcc tcccacggtgaaagagtcaccatccagggacccccaggcccacctggcccacctggacca aaaggtgatgcaggtgtcccaggtgcacctggcatcccaggagcatctcgaggtggatcc agacaaattcagggacccccaggacctcctggaccacctggtcctcctggcccaagtgga ggttcatctcaagagattcagcagtatgtgactgactacctgaagagtgacaatgtcaga cattatttcactggtgcccaaggcccaccaggccctccaggcccacctggactcatcacc actgcagatgggatgaccttggattatgcagagctggctacccgtgtcatgagctatatg acaagctcttcaggtcgttatgagtcattttctagctctgtatccactacatccattttg taccaagagcttctggacttgctgcaaagagaagaaattcgtcagtatctcattggacct cagggcccaccgggacctcctgggccagggggagatggaatgtctctgtcactggattat gatgagctgaccaggaggtttatcagctacttgtcaagttctgggatgagcattggactg cctggaccacctgggcctccagggtcacctggcatatcttacagtgacctgacagcatac ctgcgaaactctgaattcagtggtgttgttgggccccctggtcctgcaggccccccagga cctccagggatccctggatcaccaggcacctctctggaggacttctctgcctaccttcaa aatgttggatactcttccctttctggagtccggggcccacctggccctcctggccctcca ggaccaccaggtttctctggaactggcctcctgtcctatgctgacatcaccaacagcgac gagttcaggagtgagctgatccagtacctgaagagtgatgaagttcgaagctacatctca ggaccccctgggccaccaggaccaccaggacccaaaggagacagtggctttgtgtctggg tctatgtcttcatcataccaagggttacgagcttctgagcacttgcatggaggatccctt ggtgctgagggctcccatgggggctcactgggcacaggcagctcgtatggcagctccatg agcagcagatcctcttaccacacctcagtgggcagcgatggcgcttatgatgcctccatg ggtactgctgggtcttttgatgggctgctgacagaggaggaatcacacagatcatcagca gggtcgagcagatcctacagcaactccttcactggttccctggattacaacgagctggca ctccgtgtgtcagagagcctgcagagccgaggtattctccaggacctgatgtcttatacg gcacagggacctgcaggtcccccaggccctcctggtccccctggcatcagcaaggtcttt gcagcctatggcaatgtcaccgcagacctcatggacttctttagaactcatggtgccatc caggggccacccggtgaaaagggggagagaggttatcgcggacccaaaggtgaccctggg ccaatgggcccaccaggacgacatgggcacaggggaccaaaaggagagaagggagagaaa ggtgaacaactctatgttggcagaagaaaaagaagagctgttggtgtttaa

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