Serinus canaria (common canary): 103813846 Help Entry 103813846         CDS       T05755                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism scan  Serinus canaria (common canary) Brite KEGG Orthology (KO) [BR:scan00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:scan03009]     103813846 (PDCD11) Ribosome biogenesis [BR:scan03009]  Eukaryotic type   90S particles    Other 90S particles     103813846 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 OB_PDCD11 HAT_Syf1_CNRKL1_N Spt6_S1 HAT_PRP39_N OB_RRP5_4th Suf OB_RRP5 HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_14 TPR_19 PRP6_TPR DUF8501 CFAP70_mid_TPR CFAP70_TPR_C TPR_YpiA_C ARM_TT21_5th TPR_CcmH_CycH TPR_15 ARM_TT21 TPR_16 TPR_12 Motif Other DBs NCBI-GeneID:  103813846 NCBI-ProteinID:  XP_009085460 LinkDB All DBs Position Unknown AA seq 1834 aa AA seqDB search MASMEENFPRGGIQKKPAEGKTPKPKSERDNLFDVQHEEKSQKRKRSQKDQEMQKRFKAD KTVKAAVKDNVMNIGPLTIEALCEGMLLLGCIKEVSDYELAISLPNGLSGFVPVTQISDA YSNLLSKQVAQGEVLEELNSLPDLFSPGTLVRCIVTSIEKSDDGRRSIKLSIDPKQVNKG LNSTALAAGMLLSGSVLSVEDHGYLIDIGVPGTHAFLPHQKAKNYIKAAKKGPDLKIGQN LNCLIVEVKSEGRVVCLSIDRSEVAASIATERHNWALSNLLPGLVVKARVQKVAPLGMKL TFLSYFTGIVDFMHMDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLLPPFLHAGGAPRQ LPGQRMGAVLEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKEGCKHK CRIIDYSLMDEMCIVSLKNQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRG LVPSLHLSDVILKQPEKKFNIGDELKCRVLECNPGGKKLILTLKKSLIQSKLPVLTNYED AKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVLK CEPQQERLLLSFRLSSTSGPEDKQKCTPKEKKEMKYHIGEIVDVKILKKKDNGLEVSILE DEDNVVAWIPILHLSDFVATSKLLWHCLQEGDVLPRVMYLSDKGEHIILSRKSAVISAVQ EEQVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV GQTVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFGLLNQYFKELKEIRDLVRRGESS ICELVPGKRVHLVVQDVREDGSALFSGSSFTGLTVTATRYHLGDKNIGPGEKRKALVLHV DALTSEVFVSLREELLKQRPQRRLRENSQHSVVVQHITEHFAIASLPETGQLAAVPIACH LNDTFRFDSEKLRVGQTIFATLKAVKENKHGVLLAVQGPAKKNVFVRVRNESETALEEML PAVKHSLSPGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTSTLKAGQ KVTARVIGGRDVNTHRCLPITHPHFTQSIPELSIRPSEKEGEFTAMLNLKEESSLKKLGL YDVGQTVTCFVKKYNMLKHWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFRSGQAISA TVTGTDATETSLCLSLTGIQSLEQDTISVGMVTKVTPHVGLTIALPGGKAGKVSLFHLND TYTENPLGNFKVGKIVRCYILSNENGKIQLSLRQSRLNPKITSKVEDIEITSIKDVKKGQ LVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLRVN RKEKRIELSLLPEDTGMPSVLPESLGLPQYGAEEEKREADDEKKREDPKPKKKRRRENDE SGQEAKPKKRKICPADENDSGIEVYYREEEEDDQEEEAAKKKSTVRKPGEAPRLQVSMGF TWDEDNAMDIPVLDQKEESSDSEEEEDVQSKLKKRTKKEKELEKQKKEKELCKVEAALMD PSRQPQSADDFDRLVLGSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEK LNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKYKQAEELYHTM LKRFRQEKSVWLKYASFLLKQGQAEATHRLLERALKALPTKEHVDVISRFAQLEFHSGDT EHAKALFESTLSSYPKRTDIWSIYMDIMIKHGTQKEVRDIFERVIHLSLAPKKMKFFFKR YLDYEKKFGTAESVLAVKRAALEYVETKSSLADT NT seq 5505 nt NT seq  +upstreamnt  +downstreamnt atggcatccatggaagaaaactttcctcgagggggcatccagaagaaacctgcagaggga aaaacacccaagccaaagtcagagcgggacaatttgtttgatgttcaacatgaagaaaaa tcccagaaaagaaaaagaagccagaaggatcaagaaatgcagaaaaggttcaaggcagac aaaactgttaaagctgctgttaaagacaatgttatgaatattggaccactcacaattgag gctctctgtgagggcatgctgctccttggctgtatcaaagaggtcagtgactacgagctc gccatcagtttgcccaacggcctctccggatttgtgccagtcacacagatcagcgatgcc tacagcaacctgctcagcaagcaggtggcccagggagaagtcctggaggagctgaattcg ctcccagacctgttttctccagggacattggtcaggtgcattgtaaccagcattgagaaa agtgacgatggacgccgcagtatcaagttatcgattgaccccaagcaggtcaacaagggc ctgaactctacagcactagcagcaggcatgctgctctctggctctgtgttgagtgtggaa gaccatggctacctcatagatattggtgtccctggaactcatgctttcctgcctcatcag aaagccaaaaattacatcaaagcagccaagaaaggacctgacttgaaaataggccagaac ctgaactgcctcattgtggaagtgaagagtgagggcagggtggtctgtttgtccattgac cgatcggaggtggctgcatccattgccacagagcgacacaactgggcactctctaatttg ttgccagggctggtggtgaaggctcgagtgcagaaggtggccccacttgggatgaaactg acttttctgtcttacttcactggcattgtggatttcatgcatatggacccagagaaatcc atgagctattctccagaccaagtggtgaaggcctgtgtgctgtctgtacaccccacgtcg agggcggtgcggctcacgctgctcccgcccttcctgcacgccgggggagccccacgccag ctccctggccagcgcatgggggccgtgctggaggaggccacggtgaaagccttctacaaa cagtttggggccatctttgaacttgatgatggcactcttgcatttgcacggttgaagcat ctttcaaaaaccagaaaatcctttaaacctggggcatttaaggaaggttgcaaacataaa tgtcggatcattgactacagcctgatggatgagatgtgtattgtatctctgaagaaccag attattgaagcacggtttctgcagtaccaggacatccacacgggtgatgtggtgcagggc aaagtgctctctctaaaacccattgggatgcaggtgaaagtggctgatgggattagagga cttgtgccatccctccatctctctgatgtgattctgaagcagcctgagaagaagttcaac ataggagatgaactcaagtgtcgggtgctagagtgcaatcctggaggaaagaagctgatc cttactctaaagaaaagtctcatccagtcaaagcttccagtcctcacaaattatgaagat gcaaaaccaggcctgatcacacatggctttgtagtgtgtgcaagggagtttggctgcatt gtgaagttctacaacgatgtcaaaggtctggtacccaagaatgagctgggctcagaaccc atatcttgtccagataaagtcttctatgaaggccaggttcttaaagtcatggtcttaaaa tgtgagcctcagcaggaaagactcttgttgtccttcagattatcgagcacaagtggccct gaggacaaacagaaatgtactccaaaggagaaaaaggaaatgaagtaccatataggagag atagttgatgtgaaaatcttgaagaagaaagataatgggttagaagtttccatcttagaa gatgaagacaatgtcgtagcctggatccccatactgcacctctctgactttgttgctacc tccaagctcctgtggcactgtcttcaagagggagatgtcctgcccagagttatgtatcta agtgacaagggagagcacattatcttgagtagaaagtctgcagtgatttctgctgtacag gaggagcaagttgtaagaagcttctctgaaatccagcctgggatgctgttgactggttat gtgaggaatgtgatgccctttggagtgtttgtggagttcccttttggtgtgacaggactg gcacctaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtg ggacagactgtgattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctc aatctgaaggtgtctgagtgcagctcaggagattctgctgcagagagctttggcctcctg aatcagtatttcaaggagctgaaagaaatcagggacttggtgagaagaggagagtccagc atttgtgagttggtgcctgggaagagggtgcatctggtcgtgcaggatgtgagggaggat ggttcagcactgttcagtggcagctctttcacaggcttgactgtaactgccacccgctac catttgggagacaaaaatattggtcctggtgagaaaaggaaggcattggttcttcatgtg gatgccctcacatctgaagtgtttgtttctcttcgggaagaactgttaaagcaaaggccc cagcgacggctccgagagaactcgcagcactctgtggtggtgcagcacatcacagagcac tttgccatcgcgtctctgccggaaacaggccagctggcagctgtccccatcgcctgccac ctcaacgacaccttccgcttcgactcggaaaaactcagggtgggacagacaatctttgcc accttaaaagcagtgaaggagaacaagcatggagtcttgttagcagtacagggcccagcc aagaagaatgtgtttgtgagggtgcggaatgagtcagagacagcactggaggagatgctt cctgctgtgaaacactcgctgtccccaggggatgttgttaccggtaccgtcaaatccgtc aaacccacccacgtcactgttgctattgatgacaagctgacaggttcaatccatgcatcc cggatcctggatgaagtgcccataggctcttttccaacttctactctgaaagccggacag aaagtgactgctcgagtcattggaggcagagatgtgaatactcacaggtgcctgccaatc acccatccacacttcacacaatccattccagagctcagcattcgaccaagtgaaaaagaa ggggagttcacagcaatgctgaatcttaaagaagaaagttctctcaagaaacttggactc tatgatgttggacagacagtcacctgttttgtaaagaagtataacatgctcaaacactgg ctggaggtggaagttgcccctgacattcgaggaagagttcctcacctgctgctgtctctg aacaccaaggtcttaaaacatccagaaaagagctttagaagtggccaggcaatatcagct acagtgactggaacagatgccaccgaaacaagcctctgcttgtcactcacaggaattcag tcactggagcaggataccatctctgtaggcatggtaacaaaggtgactccacatgttggc ttgaccattgcactgccaggtgggaaggctggcaaagtcagcctctttcacctgaatgat acttacacagagaaccccctggggaacttcaaagttggcaagattgtcaggtgttacatc ctctccaatgagaatggtaaaatccagttgtctctccggcaatcccggctaaatccaaag ataactagcaaagtggaagatattgaaataacaagtattaaggatgttaaaaaaggccag ctagtgagaggctatgttaaatcaatcactccctcaggtgtattctttggattgtccact tctctcctgggccgaatcctgttccagaatgtttccccatactttgtacagaaacattcc ttatatgaaaagtacctgcctgaaggaaaactgctcactgccaaagtacttagggtaaat agaaaagaaaaacgtattgagctctctctcctgcctgaggacactgggatgccaagtgtc ttgcctgaatccctaggcctaccacaatatggagcagaggaagagaagagagaggcagat gatgagaaaaaaagagaagaccctaagccgaagaaaaaaaggagaagagaaaatgatgaa agtggtcaggaggcaaagccaaagaagaggaagatctgcccagcagatgaaaatgacagt ggaattgaggtgtattaccgtgaggaggaagaggatgaccaagaagaggaggcagctaaa aagaaatctacggtaaggaagcctggtgaagctcccaggctgcaagtttccatgggcttc acctgggatgaagacaatgcaatggatatacctgtgctggatcagaaggaagagagctca gacagcgaggaagaggaagatgtgcagtccaagctaaagaaacgaacaaagaaggagaag gagctggagaagcagaagaaggagaaggagctttgcaaagtggaggcggctctaatggac ccgagccggcagccccagtcagcagatgacttcgaccgcctggtgctgggcagtcccaac agctccatcctctggctgcagtacatggctttccacctccaggctacagagattgagaag gccagagctgtggcggagagagcacttaaaacaatcagtttcagggaagagcaggagaag ctgaatgtctgggtagctctgctgaacttggagaacatgtatggtactgaggagacactg atgaaggtctttgagagagcagttcaatacaatgagcctctgaaagtcttccagcatctg tgtgacatctatgccagttctgagaagtacaagcaagcagaagaattgtaccacacaatg ctgaagcgttttcgtcaggagaaatccgtgtggctgaaatacgcctctttcctcctgaag caaggccaggctgaggctacccacaggcttctggagcgtgctctcaaggctctgcccacc aaagaacatgtggatgtcatttcaaggtttgcacagctggagttccattctggagacaca gaacatgccaaggccctctttgagagcaccctcagcagctatcccaagaggacagacatt tggtccatctacatggacatcatgatcaagcatggcacccagaaggaagtccgagacatc tttgagagggtcatacacctgagcttggcaccaaagaagatgaaattcttcttcaaacgc tacttagattatgagaagaaatttggtacagcagaaagtgtcctggctgttaaaagagca gcacttgagtatgtggagaccaagagttcccttgctgacacctaa

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