Serinus canaria (common canary): 103813882
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Entry
103813882 CDS
T05755
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103813882 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103813882 (EXOSC1)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103813882 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103813882 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
103813882
NCBI-ProteinID:
XP_009085502
UniProt:
A0A8C9NU26
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPARYCVPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLERKNEDNELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccagcacgctactgcgtccctggtgagcggctgtgcagcacggaggaggcc
acggctggtagcggcacctacactcgtcatggcttcattttctcctcgctggctggctgt
ctggagagaaagaatgaggacaacgagctgcccgtggtgtcggtggtgagagacagcgag
tcccagctcctgcccaacgtgggggctgtggtgacatgcaaggtctgcagtattaactct
cgctttgccaaagtccacatcctgtatgttggctccacgccgctgaaatctaccttccga
ggcaccatacggagagaagatatccgagccacagagaaggataaggtagaagtgtacaag
agcttccgccccagtgacatcgtcctagccaaagttatctccctgggggatgcacagtcc
aactatctgctgagcacagcagagaacgagttgggtgtggtggtggcacgcagtgaggca
ggggtgcagatggtacccatcagctggtgtgagatgcagtgcccacggacacacaccaag
gagttccgtaaggtggcccgggtgcagccccagttcctgcagacataa
DBGET
integrated database retrieval system
