Serinus canaria (common canary): 103813942
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Entry
103813942 CDS
T05755
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X2
KO
K10841
DNA excision repair protein ERCC-6
Organism
scan
Serinus canaria (common canary)
Pathway
scan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103813942 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103813942 (ERCC6)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103813942 (ERCC6)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103813942 (ERCC6)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103813942 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
103813942
NCBI-ProteinID:
XP_009085572
UniProt:
A0A8C9NV62
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MPAHKSHPPDSIQEPESATTSSNDCLHNDEDLGAEQENGICDSGVGNSMGVPNSDCQAST
SMAVPLEVPRRGHPLLQINRQQIQSVSCSAHAAELKDLGVDVYDQDVLEQGVLQQVDNAI
NEATKAAKIANASKEYESVLEDLRSCATSLRHINKIIEELSPQAADNKNINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQGILGFTDFTDETNEIEYEEDEEPGPSSLGSMLMPAQETEWA
ELIRTGQMTPFGTKIPQKPERKARQLRLNEASDFEKYLADQAKLSFERKKLSRHKRAKKK
EQAKNVQCVAPAAATKEKTGKALSKTDKRLKKHLRELQKHALHIHSKARIPKEQKYLEAK
KCRHEQEDDSGESEYVPDEELFDPEAVEEEEEQASSLAENDSDYELKSLSRKRKHLVKKG
FKETENDADYVPSSEEEEHSPGKHKVRRWRDDGDVDYYKQRLRKWQKERLKDKEHQTAEE
LSEESDVEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPPFRVAVLHETGSYT
KSKVKLIHEIASCHGILITSYSYIRLMQDNIHTYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKE
VYQILNGDMQILLGLSTLRKICNHPDFVADSPRILKSVPDAETEDPNQFGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYLRMDGTTAVASRQPLVTKYNE
DKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDTQARERAWRIGQKKEVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFFKSNDLYELFTLNSPDVSQGTETSAIFA
GTGSDVQVPKPPANGTAKCDVHLAESSSRKKKSSNSYSTTHMKDSSSKAIETSEETKGTL
EAFDQNSYAKDNAQSAADTNSFNKSKEECLESDDKCMSQSVPCSAGSAENAEGLTAVVAG
EGCGTANADARTDLSLTCDAAGSWEKQDAKTEDGQFDNNHFKCISKTKHKVDILSHESHR
DKSKKKHHKDAKFEGKRIPHLVKQKQYRRENSEEQDSKKNDDYVLQKLFKKSGVHSVMKH
DAIMDASSADHVLEEAEASRVAQDALRALRLSRQQCLGAASGVPTWTGTSGLSGAPSGIK
SRFGQKRNSMLLSSHSTCASPAKKHKDGDTIKKQNIRKCSSSEHFNGRSGESSSSALDSS
SLLARMRARNHLVLPQQTRDEGDENHQPAPAPVQGSTEYDELLVDLRNFLAFQARVDGEA
STRELLQEFESKLPAEHSCVFRELLRNICTFHRSPNGEGVWRLKPEFR
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacacaagagtcaccccccagacagtatccaagaaccagagtctgccactact
tcaagcaatgattgcctacataatgatgaggacttgggagctgaacaggaaaatggcatt
tgtgacagtggtgtgggtaatagtatgggagttcccaactctgactgccaggcttccact
tccatggctgttcctttggaggtgcccagaagaggacatccccttttacagatcaacagg
cagcagattcagtctgtctcatgtagtgcacatgctgctgagctcaaagatttaggagtt
gatgtctatgaccaggatgtgttggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagcgactaaagcagcaaaaatagctaatgcatcaaaagagtatgagtcagtactg
gaggatttgagatcatgtgcaacatctctgagacatataaataaaattattgaggaactt
tcacctcaagctgctgacaacaaaaatattaacagaaaactagattctgtaaaacggcaa
aaatataacaaggagcaacagctgaagaagataaaagcaaaacaaaaacgtcttcaagga
atacttggtttcacagactttactgatgaaacaaatgagattgaatatgaggaagatgaa
gaacctggtccatcatcccttggcagtatgcttatgcctgctcaggaaacagagtgggca
gagctcatccgaactggtcagatgactccatttggaactaaaatacctcagaagccagag
aggaaggcacgacagttaaggctaaatgaagcatctgattttgagaagtacttagcagac
caggctaagctgtcatttgaaagaaagaagttatcccgtcacaaaagagcaaagaagaaa
gaacaagctaaaaatgttcagtgtgtggctcctgcagctgccacaaaggagaaaactggt
aaagccctctcaaaaacagataagcgtttaaaaaaacacttgagagagcttcagaagcat
gcccttcatattcattcaaaggccaggattccaaaggaacagaaatatcttgaggccaag
aagtgcaggcatgagcaagaggatgatagtggggagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagtagaagaggaagaagagcaggcatcttctcttgctgagaat
gattctgattatgaacttaagagtttatcaagaaaaagaaaacatttggtgaagaagggt
tttaaagaaactgaaaatgatgctgactatgttccaagctctgaggaagaggagcattca
ccagggaagcacaaagtgagacgatggagagatgatggagatgtggattattataaacaa
agactaaggaagtggcaaaaagaacgtttgaaggataaagaacatcaaacagctgaggaa
ctttctgaagaaagtgacgttgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctttttaagtaccagcagacaggtgttaggtggctttgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccattcagataattgcc
ttcttggcaggtctgagctacagcaatatgaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtctgtccagctactgtgttgcatcagtgggtaaaagaa
ttccacacttggtggcctccatttagagttgctgtgctccatgaaactggttcttataca
aagagtaaggtgaaactaattcatgaaattgcttcatgccatgggattttaattacatct
tactcgtacattcgtctgatgcaggacaatatccacacatatgattggcattatgtcatt
ctggatgagggtcacaaaatccgaaatccaaatgctgcagtcacacttgcatgcaagcag
ttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataaccttaaggag
ctctggtccctctttgactttatattcccaggaaaattgggaaccctccctgtgttcatg
gagcagttttctgtcccaataaccatgggaggatattgcaatgcctctcctgtccaggta
aaaactgcatacaaatgtgcctgtgtgttacgggacaccataaacccctacttgctgcgg
agaatgaaggctgatgtaaaaatgagcctttcacttccagacaaaaatgaacaggtcctc
ttttgccgtttgacagaggagcagcgtcaaatctatcaaaattacatcaactctaaagaa
gtttaccagattctcaatggagatatgcagattctcttaggactatcaactttgagaaag
atttgcaatcaccctgactttgttgctgatagtcccagaattttgaagagtgtgccagat
gctgaaacagaggatccaaatcaatttggatattggaaacgttctggaaaaatgatagtg
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgctgttttttactcag
tcaagacagatgatgcagatacttgaagtctttgtgagatacagaaactattcctacctc
aggatggatggcaccacagcagtagcttccagacagcctcttgtaacaaaatacaatgag
gacaaatccatatttctttttcttctaacaactcgtgttggtggcattggagttaacttg
gttggtgctgaccgggttattatttatgatcctgactggaatcctagtgtagacacacag
gctcgggaacgtgcttggagaataggccagaagaaagaggtgactgtgtacaggctgctc
actgcagggactattgaggagaagatataccacagacaaatcttcaaacaatttttaaca
aacagagtgctgaaagaccctaagcaaaatcgcttcttcaaatcaaatgatctttatgaa
ctatttactctgaacagcccagatgtgtctcaggggacagaaacaagtgcaatttttgca
ggtactggttcagatgttcaagtcccaaagccacctgctaatggcactgctaaatgtgat
gtccatcttgcagaaagcagctcacgcaagaagaagtcctccaattcctattccaccaca
cacatgaaagattcttcttctaaagcaatagagacaagtgaggaaaccaagggaactttg
gaagcctttgaccaaaatagctacgcaaaagataatgcacaaagtgctgctgatacaaat
tcattcaataaaagcaaagaggaatgcttggaaagtgatgacaaatgcatgtcccagtca
gtgccatgcagtgcagggtctgcagagaatgcagaaggtctgactgccgtggtggctggt
gagggatgtggtacagctaatgcagatgccaggacagatcttagcctcacttgtgatgca
gctggctcttgggaaaagcaggatgctaaaactgaagatgggcaatttgataataatcac
tttaagtgtatctcaaaaacaaagcacaaggtggatatactgtcacatgagagccacaga
gataagtctaagaagaaacatcacaaggatgccaaatttgaaggaaagcgcattcctcat
ctagtgaaacaaaagcagtacagaagggagaacagtgaagagcaagactcaaagaagaat
gatgactatgtcttgcagaaactttttaaaaaatcaggggtacacagtgttatgaagcat
gatgccattatggatgcttccagtgcagatcatgtgctggaggaagcagaagcgagcaga
gtggcccaggatgccttgagagccctaagactttctcgtcagcaatgtttaggagctgct
tctggtgtgccaacctggacaggcaccagtggtctttcaggtgcaccatcaggaataaag
agtcggtttggccaaaaaagaaactccatgctgctttcttctcattccacttgtgcatca
cctgcaaagaagcacaaggatggagatacaataaagaaacaaaatataaggaagtgtagt
tccagtgagcacttcaatggaagatctggagaatcatcatccagtgctctggactcttca
tctctattagctcgtatgagggcaagaaaccaccttgttttaccacagcagacaagggat
gagggtgatgagaatcatcagccagcacccgccccagtccagggttcgacagaatacgat
gagctgcttgtggatctgcggaacttcctggccttccaggcccgcgtggatggcgaggcg
agcactcgggagctgctgcaggagtttgagtccaagctgcctgcagagcactcctgtgtc
tttagagaactgctccgcaatatctgcaccttccataggagcccaaacggggaaggggtc
tggaggctaaagccagaattccgatga
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integrated database retrieval system
