Serinus canaria (common canary): 103814013
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Entry
103814013 CDS
T05755
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X12
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103814013 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103814013 (KCNMA1)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103814013 (KCNMA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
103814013
NCBI-ProteinID:
XP_009085729
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCKACHD
DITDPKRIKKCGCKRPKMSIYKRMRLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLS
SVSVNDCSTSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNM
DANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVM
PLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDM
CVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTSPDNS
PVHGLLRQPSITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSV
LDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQ
LALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPY
EFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTKSR
DSRDKQKKEMVYR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacgcaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagctcttagactgatacaattt
tcagaaatcttgcaatttctgaatatacttaaaacaagcaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataaccaacccctaacatactgggaatgt
gtttatttgctgatggtcacaatgtccactgttggctatggagatgtttatgcaaaaaca
accctcggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagtgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggttcagtccttaatccccacgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattatcatccgaagataagaattatc
actcagatgttgcagtaccacaataaggcccatctactaaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccaggcctttccaccatgttagccaacctcttctccatgaggtcattcata
aagattgaggaggatacatggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgagctggtg
tttgccaagctgaagctcctgatgatagccatcgagtacaagtcggagaagcgcgagagc
agtatattaatcaatcctggaaaccatgtcaagattcaagaaggtaccttaggattcttc
attgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaaggcctgtcatgat
gacatcacagatcccaaaaggataaaaaaatgtggctgcaaacggcccaagatgtccatc
tacaagagaatgagactggcatgttgttttgattgcggacgctctgagcgtgactgctct
tgcatgtcaggcagtgtacatagtaacatggacacccttgagagagccttcccactttct
tctgtctctgttaatgattgctccaccagtttacgtgcctttgaagatgagcagccgtcg
acactatcacccaaaaaaaagcagcgaaatggaggcatgagaaattcacccaactcctcg
cccaaactgatgaggcatgaccccttgttaattcctggcaacgagcagattgacaatatg
gatgccaacgtgaaaaaatacgactctacagggatgttccattggtgtccagccaaagac
atcgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagtgggcatgta
gtcgtgtgcatatttggggatgttaaatctgctttgattggattaagaaatttagtgatg
ccattacgagccagcaactttcactaccatgaactcaagcacattgtgtttgtgggttca
cttgaatacctgagaagggaatgggagacactgcataacttccccaaggtttcaatcttg
cctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgacatg
tgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaaggaa
tgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtcttg
caggctaattcccaaggctttacacctcctgggatggatagaacatctccagacaatagt
ccagtccatggccttttacgtcaaccctccattacaacaggagccaacatccctataata
acagagctagtaaatgattcaaatgttcagttcttggaccaagacgacgatgatgatccc
gacacagaactgtatctcacgcagccttttgcctgtggaaccgcatttgctgtcagcgtg
ctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactgatacggaca
ttggtaacaggaggagccacaccagagctggaagcactgattgctgaggaaaatgcattg
agaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcgagttgctcag
ttggctttgtatgatgggccatttgcagacctaggggacggaggttgttatggagatctg
ttttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgattaagggat
gcacatctaagcactcccagccaatgcactaaacgttacgttatcacaaacccaccatac
gaattcgagcttgtgccgacggacttgatcttctgtttgatgcaatttgaccacaacgct
ggccagtcccgagccagcctttctcattcctcccattcctcctactcttccagcaagaag
agctcatcagttcactccatcccatcaacagccaaccgaccgaaccgcaccaagagcaga
gattcccgggacaaacagaaaaaagaaatggtttacagatga
DBGET
integrated database retrieval system
