Serinus canaria (common canary): 103814138
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Entry
103814138 CDS
T05755
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
scan
Serinus canaria (common canary)
Pathway
scan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103814138 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103814138 (TAF5)
03036 Chromosome and associated proteins [BR:
scan03036
]
103814138 (TAF5)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103814138 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
103814138 (TAF5)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103814138 (TAF5)
STAGA complex
103814138 (TAF5)
TFTC complex
103814138 (TAF5)
SAGA complex
103814138 (TAF5)
SLIK complex
103814138 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
103814138
NCBI-ProteinID:
XP_030097055
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPEAGTPPPPPAVPPAAAPAAAPAAAAEGEAAGAGGDAAPSKPA
APGPAASPVALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAVALSPASAGLLG
GSGSDADSGEALLGRGTSAAAVAIGGNVATVATSSPGVAAVAAVPPGKVGGAVVVEDQPD
VSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHE
SEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLL
KRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLL
KEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDK
LDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVW
SVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNY
LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY
QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAF
SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL
WDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAY
SSQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcagaggtggcggcggtgcagccggaccccgaggca
gggacgccgccgccacctccagcggtgcctcccgccgccgctcccgccgccgccccggcc
gccgcggcggagggagaggcggcgggagccggtggagatgcggcaccctcaaagcccgcg
gcgccgggcccggccgcctccccggtagcgttggaccggcagacgcttgtggccgtactg
cagttcctgcggcgcagcaacctccgcgagtccgaggagatcctacgtcgcgaagcccgc
ctgctcggtgacgacctgggtgccgtcgccctcagccccgccagcgccggactcctgggg
ggctccggcagcgacgcggactccggcgaggcgctgctcggccggggcaccagcgctgcc
gccgtcgccataggaggcaacgtcgccactgtcgcgacttccagccccggtgtggctgca
gttgccgccgtgccgccggggaaagtcggaggcgcggtggttgttgaggaccagccggac
gtgagcgcggtgctctccgcctacaaccagcagggggacccgacgctgtacgaggagtac
tacagcggcctgaaacacttcatcgagtgctccctggactgccatcgggcagagttgtct
cagctcttttatcctctctttgtgcacatgtacttggaattggtctacaatcaacatgag
agtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgttattaccaggat
gacctgcgtgtattgtcgagcttaaccaaaaaagagcacatgaaaggtaacgagaccatg
ctggacttcagaacaagcaagtttgtgctgcgcatttcccgtgactcttatcaactcctg
aagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggagcatctt
tacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatggttgga
agcttggccggggaggcaaaacgagaggctaataaagcaaaggttttcttcggcttattg
aaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaa
ggaaagccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagtaaaaaacag
gaccctaatgctcctccccaaaacagaattcccctgccagaactgaaagactctgacaag
ctggataaagtaatgaatatgaaggaagctgcgaggcgagtgcgtcttgggccagagtgc
ctgccctccatctgtttctacacattccttaatgcttaccagggtctgactgcagtggat
attacagatgactccagcatgattgtaggaggctttgctgactctactgtcagagtgtgg
tctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctcattgac
aaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaag
attttatatggtcacagtggacctgtctatggcaccagcttcagtcccgataggaactat
ctattgtcctgttctgaggatggcactgtgagattgtggagtctccaaacattcacgtgt
ttggtgggatataaaggacacaattatccagtttgggatacacagttctctccttacggt
tattactttgtgtctgggggacatgacagagtggctcgtctgtgggcaacagatcactac
cagccattacggatctttgctggccatcttgcagatgtgacatgtacccgatttcatcca
aactccaactacattgcaacaggctcagcagacaggactataaggctttgggatgttttg
aatgggaattgtgtaagaatattcactggacataagggaccaattcattcattggcattt
tctcctaatggacgattcctggctactggagcaacagatggaagagttctgctgtgggat
attggacatggcttgatggttggcgaattgaaagggcacacagacactatctatgcgctc
agattcagtagggatggggagattttagcatcaggttcgatggataacacagttcgtctg
tgggatgctgtgaaggcatttgaagatttagaaactgatgactttactacagccactgga
cacataaacttgcctgaaaactcacaggacttgctactgggcacatacatgactaaatca
accccagttgttcatctccatttcacacgcaggaacctgctgctggctgcaggagcctac
agctcacagtag
DBGET
integrated database retrieval system
