Serinus canaria (common canary): 103814247
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Entry
103814247 CDS
T05755
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103814247 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103814247 (PRPF40A)
Spliceosome [BR:
scan03041
]
Complex A
U1 snRNP components
U1 related factors
103814247 (PRPF40A)
Complex B
103814247 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103814247
NCBI-ProteinID:
XP_030097683
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSSSTS
SASEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDAAAAASAPAAAGDAPSGASA
APAAESATATAAPTGAAPEGESAPAATTGDTDAAGTATAEEQGQGGAAPGAQDGSADTAA
AATDEAAKQEASGDAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQ
AMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKM
TSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNI
LDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQ
KSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTA
LDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNI
KLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKE
PAFEDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDD
DSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKK
ERERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDED
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgcgggtctctcatgatgggccacccaggaatgccccac
tacccccccatggggatgcaccccatgggccagagacctcccaacatgcccccagttccc
cacgggatgatgcctcagatgatgccccccatgggaggacccccgatggggcagatgcct
ggaatgatgcagtcggtgatgcctggaatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggagtgaacagcatggatgcacaagtaggagtgacccctcct
gggactcagacaacgcaccccgtggtctccacagtccagcagagctccagcagcaccagc
tctgccagcgaggagcactccaagcagaaatccacgtggacggagcacaagtccccggac
ggaagaacttactactacaacactgagaccaagcagtccacgtgggagaagccagatgac
ctcaaaacccctgctgagcaattgttgtccaagtgtccctggaaggagtataaatcagat
tctgggaagccttattattacaattcccaaacgaaggaatcccgctgggcaaaacccaaa
gagctggaggatcttgaagcaatgattaaagctgaagaaaacagcacgaagccagaggat
gcggccgccgccgcctcggctccggccgcagccggggacgctccgagcggggccagcgcg
gccccggccgccgagagcgccacggccacggccgctcctacgggagctgctcccgagggg
gaatctgccccggctgccaccacgggggacacggacgccgctggcacggccacggccgag
gagcagggccagggtggcgccgcccccggcgcgcaggacgggagcgcggacaccgcggcg
gccgccacggatgaggcggccaagcaggaggcctcgggagatgctgctgcaaagaaggaa
gatgaggatgcccaaccagttaaaaaaacctacacgtggaacacaaaggaagaggccaaa
caagcatttaaagaactgttaaaagaaaagcgggttccatccaatgcttcctgggagcag
gccatgaaaatgatcattaatgaccccagatacagtgctttggcaaaactgagtgagaag
aagcaggcctttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccaga
tccaagtacaaggaagccaaggaatccttccagcgtttcctggaaaaccatgagaagatg
acatccaccaccagatacaaaaaagctgagcagatgtttggggagatggaggtgtggaat
gccatatccgagcgggaccgcctggagatttatgaggatgttctgttcttcctgtccaag
aaggagaaggaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacatc
ctggataacatggccaacgtcacctactgcaccacctggtcagaggcccagcagtacctc
atggacaaccccacctttgccgaggatgaggagctccagaacatggataaggaggatgcc
ctgatctgttttgaggaacacatcagggccttggagaaggaggaggaggaagagaagcag
aaaagtttgctgagggaaaggaggaggcagcgtaaaaacagggaatcttttcagctgttt
ctggatgagctgcacgagcacgggcagttacactccatgtcctcctggatggaattgtac
ccagccatcagctccgacatcaggttcaccagcatgctcggccagcctggatcaacagca
cttgacctgttcaagttttatgtggaggatttaaaagctcgttaccacgatgagaagaag
ataattaaagacatcctaaaggataaaggatttgtggtggaggtgaacacttcctttgag
gattttgtcactgtcatcagctccacaaaaagagccaccaccttggatgcagggaatatc
aagctggctttcaacagtctgctggagaaggcggaagcgcgggagcgggagcgggagaag
gaggaggctcgaaagatgaagaggaaggaatcggccttcaagagcatgctgaaacaagcc
accccccccatcgagctggatgctgtctgggaggatatcagagacagatttgtgaaggaa
ccagcatttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttcctt
catgtgcttgagcacgagtgtcagcaccaccactccaagaccaagaaacattcgaagaaa
tccaaaaagcaccaccggaagcgctcgcgttcccgctccggctcagagtctgaggatgac
gacagccactccaagaagaagcggcagcgctcggaatcgcggtcggtgtcggagcgttct
tccagcgccgagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaag
aagaggaggcacaagtctgattcaccagaatctgatgtagagcgagagaaggacaagaaa
gaaagagagagggacagtgagaaggaaagagccagacagagatctgagtccaagcataaa
tctcccactaaaaaacggcctggaaaagattccgggaactgggatacctctggcagcgag
ctcagcgagggggagctggaaaaacagaggaggactcttttggagcagctggatgaagat
caatga
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