Serinus canaria (common canary): 103814584
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Entry
103814584 CDS
T05755
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X5
KO
K06238
collagen type VI alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
scan04518
Integrin signaling
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103814584 (COL6A3)
04518 Integrin signaling
103814584 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103814584 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103814584 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103814584 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103814584 (COL6A3)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103814584 (COL6A3)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103814584 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
103814584 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Ig_J
Motif
Other DBs
NCBI-GeneID:
103814584
NCBI-ProteinID:
XP_009086444
UniProt:
A0A8C9N0Q1
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MRKHRHLPLVAMFCLLLSGFGSVGAQQQAAVKTVAVADIIFLVDSSWSVGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTFPSTQDVLSHIANMTYVGGGAEPGKG
LEYLIEKHLTKAAGSRASEGVPQVIVVLTDGQPRDDVALPSSLLNSARVNLFAVGVQEPV
EGELQEVASGPLDTHRFNLENFTTLHGIVGDLVASVRSSMTPEKAGAKGLVKDITAQESA
DLIFLIDGSNNIGGVNFPAIRDFLVNLIETLRVGAQQIHIGVVQYSDQPRTEFSLNSYST
KADVLDAVKALGFRGGEEANTGAALEFVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQAGIFSFSIGVLNADSAELQQIATDGSFAYTALDIRNLDALQELLLPNIVG
VAQRLILLAAPTIVTEVIEVNKKDIVFLIDGSTALGAAPFNAIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTYQTRKDVMANVRKMKLMGGTTLNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSRDAVDQAAAEMKRNRIVTLAVGSRNADLAELQEIAHEQDF
VFNPNDFRLQFMQAILPEVLSPIRTLSGGLIVPEQPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKTRVGLVQFSDTPQTEFSLYSYQTKSDIIQRLGQLRPKGGS
VLNTGSALNFVLSSHFTEAGGSRINEQVPQVLVLVAAGSSADPFLQVSNELARAGVLTFA
VGVRNADKAELGQIAFNPRMVYFVDDFSALAALPQELNKPITTYVSGGVEEVPLAPTESK
KDVLFLIDGSANLLGSFPAVRDFVHKVISDLNVGSDATRVAVAQFSDTIQIEFDFAEYSS
KQDMLVKVKRMKIKTGKQLNIGAALDEAIRRLFVKEAGSRIEEGVPQFLVLLVAGRSTDD
VEEPSDVLKHAGVVTFGIKAKNADPVELERIVYAPQFLLNAESLQRISELQPNIVNLLRT
VQLQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSN
TIQPEFLLDTHEDKADLISAIQQLKLMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DSVQQVVSNRVIRLTKQEIESLAPDLVFTSPSPAGVKRDIVFLVDGSRYAAQEFYLVRDL
IGRIVNNLDVGIDTTRISVVQFSEHPHVEFLLNTHSTKDEVQNAVRQLRSKGGQLVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDFEYPSLQVKQVGVAPMMIAKNVD
TEEMIQISLSPEYIFQVSSFQELPSLEQKLLTPIETLTVDQIRRLLGDLQPPIDVSGDEK
DIVFLIDSSDSVRPDGLAHIRDFISRIVQQLEVGPNKVRIGVVQFSNGVFPEFYLKTHKS
KNAVLEAIRRLRLRGGSPLNAGKALDFVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VDRPARVITSTNIKPLGVGARNVDRDQLQVITNDPGRVLVVQDFTGLSTLEKRVQNILDE
LPIPTTDSPGPSLPGGKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDHSTKAQILDAINKVIYKGGRVANTGAAIKHIQERHFVKEAGSR
IDQRVPQIAFIVTGGKSTDDGPRASLEITQKGVKVFAVGVRNIDLKEVSLLASESAMSFR
AATAQELSELNEQVLVTLEAAMEERLCPGTTDVTRDCDLEVVIGFDVSDVRPGQNIFSSQ
RGLESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQAQGGPVEGLDFSEYQPELLERFL
DMRTRGPYYLRADTLRSYLSKFRSSPAGSTKVIIHFTDGVDEPINQLEDASSTLHSEGVN
ALIFVGLDRVTNFDRVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCKVPCK
CSGQRGDRGVPGPIGPKGVTGDLGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGYSGRRGDKGVKGERGERGDRGLRG
DPGDSGADNTQRGPRGQKGEIGPMGDPGPAGPEGQDGEVGRRGMAGRRGPIGVKGTKGSP
GQPGPAGEQGMRGPQGPPGQVGTPGIRGEQGVPGPRAGSGPPGPPGDRGRIGPLGRKGEP
GNPGPKGPNGQPGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYAGPKGGPGDRGVAGGPG
PKGNRGRRGNAGVPGTPGQKGEIGYPGPSGLKGEKGESRDQCALVQNIKDKCPCCYGPKE
CPVYPTELAFAIDTSSGVVREVFNRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGDTRASPQLNDAVLKLYDAGVVPVFLTSRQDAVLARALEINNTAVGHAIVLPTSGGQL
NQTIQRLLTCHICLDVCDPHPSCAGTGQRPAFRDRRAAPTDVDTDIAFILDSSESTTPLQ
FSEMRKYISHIVTNLEISSEPKVSQHHARVAVLQQAPYEHETNSSFPPVKTEFSLTDYAS
KEKIINYLHNQMTQLHGTRALGSAIEHTIAHVFESAPSPRDLKVIVLMMTGKVNKKELEH
LQRAVISAKCKGYFFVVLGIGRKVNAKNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGT
LLPSFIRSEFAFYLSPEIRKQCEWLQNGQQIQGQHPVLIGQKAVFVAPNATASRTFPAST
TVSATIKPAASAHATTTPASTTAQARAPETTPASSVAQGNATAQGAASATTTHSKASARA
ATSNATGTAAGGRRRHSAKTQDLQITDVTESSARLRWASPEPHSTFDVTVTLAQDHSLVQ
RQNLTGTEHVIRGLRSGQKYVVVITGSQKSQPKVTYTGSFSTKTQAQSQVSLANMMLNTE
PLEGPESVMDVCRLQKDEGTCRNFVLKWYYDPETKSCARFWYGGCGGNDNRFNTQKECEK
LCSPGTINPGVVTAMGT
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgcccctcgtggcaatgttttgcctcctgctctcaggcttt
ggctcggttggtgctcagcagcaagcagctgtcaaaaccgttgccgtggctgatataata
tttctagtggattcctcctggagcgttgggaaggaacacttccaactcgttcgagagttt
ctgtatgatgttgtaaaggctttagatgtgggaggaaatgattttcgctttgccctggtc
cagttcagcggaaacccccacacagagttccagttaaataccttcccctccacccaggac
gtcctgtcccatattgccaacatgacttacgtggggggaggcgccgagcctggaaaagga
ttagagtacctaatcgagaagcacctcactaaagctgctggaagcagagccagtgaaggc
gtgccccaggttattgtagtgctaacagatggacagccccgggatgatgtggctctgccc
tcatctctccttaactcggcccgtgtaaacctgtttgcggtcggcgttcaggagccagtg
gaaggggagttgcaggaagtagcgagcggacccctcgatacgcaccgcttcaacctggag
aactttaccactctccacggcatagttggggacttagtggcgagtgtccgctcctccatg
actccagaaaaggctggagccaaaggactggttaaagacatcacagctcaagagtccgct
gacctaattttccttattgacggatcaaacaacatcggaggtgtcaattttccagccata
cgcgatttccttgtaaatttgattgaaaccctcagagttggagctcagcagatacacatt
ggggtggtgcagtatagtgatcaacccagaaccgagttctctttgaacagctactccaca
aaagcggatgtcctggatgccgtgaaggcactcggattccgcgggggcgaggaagcgaac
accggtgcggcactggagttcgtggtggagaacctcttcacccaggcgggaggcagcagg
atagaggaagcagtgcctcagattttagtgctgataagtggtggagagtctagtgatgat
atccgagagggcttgttagcggtgaagcaagctggtatattttcgtttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcctatact
gccctggatatccgtaaccttgatgctcttcaagaattattactgcccaacattgttgga
gtggcccaaagactcattttgttagcggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggctcaactgctttgggggccgcccccttt
aatgcaattcgtgatttcgttgccaaaattgtccaaaggctggaggttggacccgacctg
atccaagtggcggtggcacagtatgcagacactgtgaagccagagttttattttaacacc
taccagaccaggaaggatgtgatggccaatgtgaggaagatgaagctcatgggtggcacg
acactcaacactggctcggcactggactttgtgaggaacaacttcttcaccagtgctgct
gggtgcaggatggaggaaggggtgctccccatgctggtgctcatcactgggggtaagtcc
agggatgctgttgaccaagctgcagcagagatgaagaggaacaggatagtgacccttgct
gttgggtcaagaaacgctgacctggcagagcttcaagaaattgctcatgaacaagatttt
gtgttcaacccgaacgacttccgcctccagttcatgcaagccatccttcctgaagtgctg
tcacctatccggacactctctggaggactgatcgtcccagagcaaccctcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgggactttgtggccaccctagttaactaccttgatgtcggcagcgacaaa
acgcgagtgggcttagtgcaatttagcgacaccccccaaaccgagttctccctgtactcc
taccagaccaaatctgacataatccagcgcctggggcagctgaggcccaaggggggctcg
gtgctcaacaccggctccgcgctgaactttgtgctctcgagtcacttcacggaggccggg
gggagcaggataaatgaacaagtgccccaggtgctggtcctggtggcagcagggagctct
gctgatcccttcctccaagtttccaatgaattagctcgggccggagtgctgacctttgct
gtcggcgttaggaatgcggataaggcagaacttggacagattgcctttaatccaagaatg
gtgtattttgtggatgatttcagtgccctggcagctttaccccaggagttaaataagccc
ataacaacatatgttagtggaggtgtggaagaggttccactcgccccaacagaaagcaag
aaggatgttttattcctgattgatggctcagccaacctcttgggcagctttcctgccgtc
cgggactttgtacacaaagtcatttctgacctgaacgtgggttctgacgccacacgagtc
gccgtagctcagttcagcgacaccatccaaattgaatttgactttgccgagtactcatcg
aagcaagacatgcttgtcaaagtgaaaaggatgaagattaaaactgggaagcagctgaac
attggagctgcacttgatgaggctataaggaggctgtttgtgaaggaagctggaagcagg
atcgaagaaggagttcctcagtttttggtcctccttgttgctgggagatcgactgatgat
gtggaggagccatcagatgtcctgaagcatgctggagtggtaacttttggtatcaaagcc
aaaaatgctgaccctgtagagctggaaaggattgtttacgcccctcaattccttctgaat
gccgaatccctccagcggatttcagagcttcagccaaacatagtcaacctgctgagaaca
gtccagcttcagccaacagtagttgagagaggtgagaagaaggatgtggtgtttctgatc
gatggctcggatggtgtcagaagaggtttccccctcctgaagacgtttgtccaaagagtt
gtggagagcctggacattggccgcgacaaggtgcgcgtggctgtggcacagtacagcaac
accatacagcccgaattcctgctggacacccacgaggacaaagcagatctcatcagtgcc
atccagcagctgaagctcatgggagggtctcctctgaacacgggggcagccctcgactat
ctcatcaagaacgtgttcacggtgtcaagcggcagcaggatagcggagggcgtcccgcag
ttcctgatcctgctgactgctgaccggtcccaggatgatgtcaggaggccctcagtggtc
ctgaagacgagtggcacagtgccctttggcattgggatcggaaatgccgacctcacagag
ttgcagaccatttccttcctcccagattttgctatctctgtgcccgacttcagccagctg
gactcagtgcagcaggtcgtctccaacagagtcatccggctgaccaagcaagagatagaa
tctcttgcccctgacctggttttcacatcacccagcccagcgggcgtgaagagggacatc
gtgttcctggttgacggctcccgctacgccgcccaggagttctacctcgtccgcgacctc
atcgggaggatcgtgaacaacctggacgtgggcatcgacaccaccaggatctcggtggtg
cagttcagcgagcacccccacgtggagttcctgctcaacacccactccaccaaggacgag
gtgcagaacgccgtgaggcagctgcggtccaaaggtggccagctggtgaacgtgggggag
gccctggagtttgtggccaagaccatcttcacccggccctccgggagccgcatagaggag
ggcgtcccgcagttcctggtcatcctctcctcccgcaagtccgacgatgactttgagtac
ccgtccctccaagtcaagcaagtgggggtggcacctatgatgatagcaaagaacgtggat
actgaagagatgatacagatttcccttagtcctgagtatatattccaagtctccagcttc
caggagctgcccagcctcgagcagaagctgctgactccaattgaaaccctgactgtggac
caaatcaggcggctgctgggagatctgcagccccccatagatgtttctggagatgaaaag
gacatagtcttcctcattgacagctctgacagcgtccggccggatgggctcgctcatatt
cgggatttcatcagcaggattgtccagcagctggaagtggggccgaacaaagtgcggatt
ggggtggtgcagttcagcaatggtgtcttccctgagttctacttgaagacccacaagtcc
aaaaatgccgtcctggaagccatccgccgcttgaggcttagaggtgggtctcccctgaat
gctggcaaagctctggacttcgtggtgaagaactacttcatcaagtctgcggggagcagg
atagaagatggagtgccccagcacctggtggtcatccttggagaccggtcccaggatgac
gtggacagacctgccagagtgatcacttccacaaacatcaaacctctgggtgtcggagcc
aggaatgtggacagggaccagctgcaggtcattaccaatgatcctgggcgcgtgcttgtg
gtacaggactttacaggactctcaaccttagaaaagagggtgcagaacattctagatgag
ctcccaatacctacaacagactcacctggaccatccctacctggaggcaaaaagcaggct
gacattgtgtttttgctggatggctccatcaatctggggagggataacttccaagaagtc
ctccagtttgtctactctgtggtggatgccatttacagggatggcgactcgatccaggta
ggactggcccagtacaactcggatgtcactgatgagtttttcctcaaggaccactccacc
aaagctcagattttagatgctatcaacaaagtcatctacaaaggcgggcgagtggcgaac
accggcgcggccatcaagcacatccaggaaaggcactttgtgaaggaggctggcagcagg
attgaccagagggtgccccagatcgccttcatcgtcacgggtgggaagtctacggatgat
gggcccagggcctccttggaaatcacgcagaaaggcgtcaaggtgtttgcagttggagtg
aggaacattgacctgaaggaagtcagcctgttggccagtgagagcgccatgagtttcaga
gcagccacagcccaggagctgtcagagctgaatgagcaggtcctggtcacgctggaagct
gccatggaggaaagattgtgcccaggaacaacagatgtgacaagagactgtgacttagag
gtggtaattggatttgatgtcagtgatgttaggcccggtcagaacatcttcagctcccag
cgaggcctggagtcgagagtggagtccgtgctgaacaggataacacagatgcagaagatc
agctgcactggcaaccaggcacccaatgtcagggtggccatcatggcccaggcccagggg
ggacccgtggaggggctggacttctctgagtaccagcccgagctcttggagaggttcctg
gacatgaggacccgcgggccctactacctcagggcagacacactgaggtcctacctgagc
aaattccggtcctcacctgctggcagcaccaaggtcataatccattttactgatggtgta
gatgagccaataaatcagctggaggatgcttcctctactttacactcagaaggagtcaac
gctctcatcttcgtggggctggaccgagtgaccaactttgacagagtgatgcagctggag
tttggccgtggcttcacctacaacagaccactcagagttaatctgctggacttggatttc
gagctggcagagcagcttgataacatcgcagagaggacgtgctgcaaggtcccctgcaag
tgctcagggcagagaggggacagaggtgtgccaggccctataggaccaaagggtgtcaca
ggggatcttggctacggaggctaccctggtgatgaaggaggaccgggtgagcgtggacca
ccgggtgtgaatgggacacaaggtttccagggatgccccgggcacagaggaacaaagggt
tctcggggattcccaggagagaagggtgaactgggagaaatgggtctggatggcattgat
ggagaagagggagacaagggtttgcctggctcctctggagagaagggatattctggcagg
aggggagataagggagtcaagggagaacgaggggaacgaggcgaccgtgggctccgtgga
gatccgggagattcaggagctgataatactcaacggggccccagaggacaaaagggtgaa
attggaccaatgggagatcctggaccggcagggccagagggccaagacggtgaagtgggg
aggaggggcatggcaggacggaggggacccataggagtaaagggcaccaagggctcacct
ggtcagcctgggccagctggagaacaaggcatgcgagggccacagggtccccctggccag
gttggcacaccaggaatcagaggagagcagggagtccctggacccagggctgggagtgga
cctccaggacccccaggagatcgtggcaggattggtcccctgggaaggaagggtgagcct
ggaaaccctggacccaaagggccgaatggacagccaggcccacgaggagagatgggtgat
gatggacgagatggaattggtggcccaggtcctaaaggcaggaagggagaacgtggcttc
gtaggttacgcagggccaaagggtggacctggtgaccgtggtgttgctggaggccctggc
cccaaaggaaacagaggccgcagaggaaatgcaggagtacctgggacacccggtcagaaa
ggagagattggataccctgggccatctggccttaaaggcgagaaaggagaatccagagat
caatgtgcgctggtgcagaacatcaaagacaaatgcccttgctgctatggtcccaaggag
tgccctgtctacccaaccgagctggcctttgctattgacacctcctcgggcgtcgtgagg
gaggttttcaacagaatgaagcaaaccgtgctcagagtggtcaacaacttgaccatcgcc
gagagcaactgtccccgtggggcacgggtggccctggtcacctacaacaacgaggtcacc
accgagatccgctttgctgacgccaggaagaaatccagcctcctgcagcagatccaaaac
ttccaggcaacgctgaccacgaagccacgcagcctggagaccgccatgtccttcgtggcc
aggaacaccttcaagcgtgcccgcagtggcttcctgatgaggaaggtggctgtcttcttc
agcaacggggacaccagggcgtccccgcagctcaacgatgccgtgctgaagctctacgac
gccggggttgtgccggtgttcctcaccagcaggcaggatgcagtgcttgccagagctctg
gagatcaacaacacagcggttggtcacgccattgttcttccaaccagcggcggacagctg
aatcaaaccatccagaggcttttgacttgtcacatttgtttggatgtgtgtgacccccat
cccagctgtgctggaactggccagagacctgccttccgagacagaagggcagcccccact
gacgtggacacggacatagccttcatcctggacagctccgagtccaccacccccctgcag
ttcagcgagatgaggaagtacatttcccacattgtaaccaacctggagatcagctcagag
ccaaaagtatcccagcaccacgccagagtggccgttctccagcaagctccttacgaacat
gaaaccaactcaagcttcccaccagtgaaaactgagttctcactcactgattatgcatcc
aaagagaagatcattaattatctccacaaccaaatgacccagctccatggcacgagggct
ctgggaagtgcaatcgaacacacaatcgctcatgtcttcgaaagcgcgccaagccctcgg
gatctaaaagtcatcgttctgatgatgactggaaaagtgaacaaaaaagaacttgagcac
ctgcagagggctgtcatcagtgcaaaatgcaaagggtacttctttgttgtcttgggcatt
ggcaggaaggtgaatgccaagaacatctacagccttgccagcgagcccaacgacgtgttc
ttcaagctggttgataaaccaggagagctccatgaagagcccttgctgcgttttgggaca
ctgctgccatcctttatcagaagtgaatttgctttctacctgtctccagagataaggaaa
cagtgtgagtggctccagaatggtcagcaaatccagggccagcaccccgtgctcatcggg
cagaaagcagtgttcgtggctcccaacgcgaccgccagccgcaccttccctgccagcacc
acggtcagcgccaccatcaagccagcggcgagtgcccacgccacaaccactcctgccagc
accacggcccaggccagagcccccgagaccaccccagccagctctgtggcccaggggaac
gccactgcccagggagcagccagtgccaccaccacccacagcaaagccagtgcccgggct
gccaccagcaatgccaccggcaccgcggccggcggcaggaggagacacagcgcaaagacc
caggacctccagatcacagacgtcactgagagcagtgccagactgcgctgggccagccct
gagccccacagcacctttgatgtcactgtcaccttggcacaggaccactccctcgtgcag
aggcaaaacctgaccggcaccgagcacgtcatccgggggctcaggagcgggcagaaatat
gttgttgtcatcactggctcccaaaaatcccagcccaaagtaacctacacagggtcattc
agcacgaagacccaggcacagtcccaggtgtccctggccaacatgatgctcaacactgag
ccactggaagggcctgagagtgtgatggatgtctgccggctgcagaaggacgagggcacc
tgcaggaactttgtgctgaagtggtactacgaccccgagaccaagagctgcgcccgcttc
tggtacggcggctgcggcggcaacgacaacaggttcaacacgcagaaagaatgtgaaaaa
ctctgcagccctggcaccatcaaccccggcgtggtgacggcgatggggacatag
DBGET
integrated database retrieval system
