Serinus canaria (common canary): 103814794
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Entry
103814794 CDS
T05755
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan04115
p53 signaling pathway
scan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103814794 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103814794 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
103814794 (COP1)
Enzymes [BR:
scan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103814794 (COP1)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103814794 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103814794 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
103814794
NCBI-ProteinID:
XP_018767540
UniProt:
A0A8C9N5F2
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MSGSRPPHPAVPPAATPASSSSSSSSSSSSSSSSSSAAMAPGSSSSGGAAARPVLVAAAV
SGSGAGLARLAAGAARPGGSSAAPGGGGRKRPLLTPLCNGLINSYEDKSNDFVCPICFDM
IEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSEE
KRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQ
ILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSH
SSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDD
SRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVT
KKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFT
GQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVK
FSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQL
KLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDT
VKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagccgcccgccgcaccccgccgtgccgcccgccgccacaccggcctcctct
tcctcctcttcctcgtcatcctcatcctcctcctcctcctcctcttcggcggccatggcc
cccggctcgtcctcctcgggcggcgcagcggcgcggcccgtgctggtggcggcggccgtg
tcggggtcgggcgcggggctggcccggctggcggcgggggcggcgcggcccggcggctcc
tccgcggcgccggggggcggcggcaggaagaggccgctgctcaccccgctctgtaacggg
ctcattaactcctacgaggacaagagcaacgacttcgtgtgccccatctgttttgatatg
attgaagaagcctacatgacgaaatgtggacacagcttctgttataaatgtattcaccag
agcctggaggacaataacagatgtcccaaatgcaactatgttgtggacaacatagatcat
ctttatcccaatttcttagttaatgaattaattcttaaacagaagcaaagatctgaggag
aaaagactcaaactggaccattcagtgagtagcaccaatggccacaggtggcagataatt
caagatttgttgggaactgatcaagacaatcttgacttagccaatgtcaacctgatgctg
gagctgctggtgcaaaagaagaagcagttggaagcagagtcccatgctgcccaattgcag
atcctgatggaattccttaaagttgccaggagaaacaaacgagagcaattggagcagatc
cagaaggagctaagtgttctggaagaagatattaaacgtgtagaggagatgagtggcctg
tactccccagtcagtgaggacagcacagtgccacagtttgaggctccctcaccttcacac
agtagtattattgactccaccgagtatagccagcctccaggcttcagtggcagttctcag
accaaaaagcagccgtggtataacagcacgctggcctcgcgacgcaagcgcctcacagcc
cattttgaggacctggagcagtgctatttctccactaggatgactcgtgtctcggatgac
agcagaaccaccagccagctggatgagtttcaggagtgtctgtccaagttcacgcgctac
aattctgtccgaccgctggcaacgctgtcctacgccagtgacctctacaatggctccagc
atagtgtccagtattgagtttgaccgagactgtgactactttgccatcgctggagtgaca
aagaagattaaagtctatgagtatggtacagtcattcaggatgcagtggatattcactac
cctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttaccac
aagaacctgctagccagcagtgactatgaaggcaccgtcatcctttgggatggattcaca
ggacagagatccaaggtctaccaggagcatgagaaaaggtgctggagtgttgactttaac
ttgatggaccctaagctattggcttcaggctctgatgatgccaaagtgaaactgtggtct
accaacttggacaactcagttgcaagcattgaggccaaggctaacgtgtgttgtgtcaaa
ttcagcccatcctctaggtatcacctagcttttggctgtgcagatcactgtgttcactac
tacgacctgcgcaacactaagcagcccatcatggtgttcaaggggcaccgcaaggccgtc
tcctacgctaagttcgtcagcggcgaagaaatcgtctccgcgtcaacagacagtcagctg
aagctgtggaacgtagggaagcctcactgcctgcgctccttcaagggtcacatcaacgag
aagaactttgtggggctggcgtccaacggagactacattgcctgtggaagtgaaaataat
tccctttacttatactataagggcctctcaaagacactgctgacattcaagtttgataca
gtcaaaagtgtcctggacaaggaccggaaagaagatgacacaaatgagtttgtgagcgcc
gtgtgctggagggcacttccagatggggagtccaacgtgcttattgctgctaacagtcag
ggtacaattaaggtactggagctggtatga
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integrated database retrieval system
