Serinus canaria (common canary): 103814818
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Entry
103814818 CDS
T05755
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103814818 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103814818 (SMG7)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103814818 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103814818 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103814818
NCBI-ProteinID:
XP_030082238
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFVTEIPELLLEDPSEAKESLTLQETSMVEPLCADGSPGLKSVLSSGRSLSNSCDAG
EKPMVTFKENIKPREMNREQGRIYPPKDIARERRDFSKGIVANKNDGKKDNNKRKNETKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAV
QGLGKSPPHHSGFQQYPQTDTSKQLWNPPQVQGSLGKIMSVKQPYYLQAQDPLKLFEQSL
QPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMTDNRVMTQQSSMDRRGKR
QGVFRSEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLAS
LPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNINTSTKTEVT
PSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFS
NFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPTTSSSSESSWHQSSAPSGTWAVQGP
PAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttatat
caaaaaatgctagttactgatttggaatatgctttagataaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaacagagca
aatccgaatcggagtgaagttcaggcgaacctttctctgtttttagaggcagctagtggc
ttctacacacagttactccaggaattgtgcacagtttttaatgtagacctgccgtgccgt
gtgaagtcttcccagctggggatcattagcaataaacagacgcacaccagcgccatcgtg
aagccgcagtccagctcctgctcctacatctgccagcactgccttgtccacctgggagat
attgctcgctataggaatcagaccagccaggcagaatcttactatagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctattctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcgatggagcgtgtctgacttcatcaaggcatttattaaatttcatggccatgtg
tacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaacagttc
aagaggttgttgttccagaaggccttcaactctcagcagttagtccatattactgtgatc
aacctgttccaactgcaccacctgagagacttcagcaatgaaacagagcagcacagctac
agccaggatgagcagctctgctggacacagctcctggctctcttcatgtcatttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttccaggag
gcagtggttgatgagagacggtacatatggccctggctgatctctcttctaaatagtttc
cagcctcatgaagaagatctatccagtaataatgcaaccccgcttccagaagaatttgag
ttgcaaggattcctggctctgaggccctcattcaggaacttggatttttccaaaggccat
caggcaattacaggggataaagaagggcagcaacgtcggatacggcagcagcgcctgatc
ttcacaggcaaatggattgctgataaccagccaaggttgattcaatgtgaaaacgaggta
ggaaagctcttgtttgtgacagaaatcccggagctcttactggaggaccctagtgaagcc
aaagagagtctcaccttgcaggagacatccatggtcgagccactgtgtgctgatgggagc
cctggactcaaatcagtgctgtcctctggcagaagcctgagcaacagctgtgatgcagga
gaaaaacccatggtcaccttcaaagagaatatcaagccccgggagatgaacagagagcaa
gggcgcatctaccccccaaaggacatagcaagggagagacgggactttagcaagggaata
gtagcaaataagaatgatgggaagaaggataacaataaaaggaagaatgagaccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcc
cagacggagatgaggaagactccggtatctgaagccaggaaaacacctgtaactcagact
ccaagccaggccagcagttcccagttcatccctattcatcacccaggagccttccctccc
cttcctagccggccaggatttcctcctccaacctatgttgtcccccctcctgtggctttc
tccatgagcacggggtacaccttcccaggtggtgtttctgtcccaggaaccttcctccag
cccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacacca
cctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtccgcaagc
cagttacaggtccaagctctggcccagcagcagcagcagcagtcccccacgaaagctgtg
cagggcctggggaagagcccaccacaccactctggattccagcagtatccacagacagac
acgtcgaagcagctctggaacccccctcaagtccaaggctccctggggaagatcatgtct
gtaaagcagccctattacctgcaggcccaggaccctctcaaactctttgaacagtcatta
cagcctcctgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggag
ccatataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctat
ggcatgacggacaacagggtgatgacccagcagtcgagcatggaccgcagggggaagcgg
cagggagtcttccgctccgagcaggatgctgtctccaggatgacctttgaggaccccaag
agctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaa
gagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctct
cttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcag
tcatcatctttcctgtccctcagtggcttttctctaaatcaggaaagatatccaaacaac
agcatgttcaatgaggtatatggaaaaaacatcaataccagcacaaaaacagaagtcacc
ccttcagttgcccatcaggagacttcactctattctctctttgaagggactccgtggtct
ccatcccttccagccagctcagatcattcaacaccagccagccagtctcctcactcctcc
aaccccagcagcttgccaagctcccctccaacccataaccacaattctgttcctttctct
aactttggacccattgggactccagacaacagagaccggagagtcgcagaccgctggaaa
acagataagccagcaatgggagggtttggtctggactatctcccaacaacatcgtcctct
tcggagagcagctggcaccagtccagtgctcccagtggtacctgggcagtccaaggccct
cctgccatggaggactcttcagctgtgcttatggagagcctgaagtccatctggtccagt
tccatgatgcaccccggcccctcggccctggagcagctgttgatgcagcagaagcagaag
cagcagcgcggacaaggtgccatgaatccgccgcattga
DBGET
integrated database retrieval system