Serinus canaria (common canary): 103814865
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Entry
103814865 CDS
T05755
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scan03016
]
103814865 (TRMT13)
Enzymes [BR:
scan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
103814865 (TRMT13)
Transfer RNA biogenesis [BR:
scan03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103814865 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF1192
DUF7077
Motif
Other DBs
NCBI-GeneID:
103814865
NCBI-ProteinID:
XP_009086749
UniProt:
A0A8C9NEJ1
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAARGPLGAAMAAPEPGRCAHFVLRKKRFCKMIPAPGRRFCGEHGHEEEQNDRKRIPCPL
DPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDAAEIPEKQVPLSSLSIEELQN
LITRLKKATNGLELHLKEQILSHQALQEALSDPKNGESAFKHLKQQASILGNMEKLHLLG
PGKCFVEFGAGRGKLSHWLDIALENVESVQFLLVERATTRFKVDGKHKRRDSIFERLQVD
IQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDGKDEEPAPKRCRA
VQTEVAPHKSAGNESITEDHKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYF
QRMSSWATCGMQETTSKASTSEDSGDQTNDTEEHEHTLSRTASGSDTLQGILSVEERKEI
GCLCKRLIDHGRIEYLQQRGYKAALQYYTEPAVSLENVLLTAVPSPSVIPEPTI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggccgctgggagcggcgatggcggcgccggagccgggacgctgcgct
cacttcgtgctgaggaagaagcgcttctgcaagatgatcccggcgcccggcaggcgcttc
tgcggggagcacgggcacgaggaggagcaaaatgacagaaaaagaattccgtgccctctt
gatccaaaacacactgtatatgaagaccaactacaaaagcatttaaaaaaatgtaactca
agagagaagccaaagcctgtgtactttgttcaagatattaatgctggtttaaaagatgca
gcagaaataccagaaaaacaggttccactatcttctctatctatcgaagagctccagaat
ttaattactaggttgaaaaaagcaactaatggcctggaacttcatcttaaggaacaaata
ctgtcccaccaggctttacaagaagccttaagtgacccaaagaatggggaatctgctttc
aaacacctgaaacaacaggcttctattttaggtaacatggaaaaattgcatttacttggt
ccaggaaagtgttttgttgagtttggagctgggcgaggaaagctgtctcattggcttgat
attgctttagagaacgttgagagtgttcagtttttgcttgtggaaagagcaaccacaaga
ttcaaggtggatggaaaacacaaaaggagggattccatatttgagaggcttcaagtagac
attcagcacttatgtttaaataaggtacctattttggagaagaaaaaactaccagtggta
ggaattgggaagcatttgtgtggtgctgcaacagatcttgctttgagatgcttggttgaa
agttacaccacttgctgtgatggaaaagatgaagagcctgcaccaaaacgctgcagggct
gttcagacagaggtggctcctcacaaatctgctggcaatgaaagcatcacagaagaccat
aagcctgtagctggaattgttattgctctgtgttgccatcacaagtgtgactggacacat
tatgtaggcagagagttctttaaatcagtaggacttggaccagtagaattccattatttt
cagagaatgagtagttgggccacttgtggcatgcaagaaaccacaagcaaagcttctaca
agtgaagacagtggagatcaaactaatgacacagaagaacatgagcacactctcagcagg
acagcaagtggttctgatactttacaagggatactgagtgttgaggagcggaaggagatc
ggttgcctctgcaaacggctgattgatcacgggcggattgagtatttacaacagcgagga
tacaaggctgcactgcagtattatacagagcctgctgtgtccttggagaatgtcctgttg
acagctgtcccaagtccttctgtgataccagagccaactatatga
DBGET
integrated database retrieval system
