Serinus canaria (common canary): 103815168
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Entry
103815168 CDS
T05755
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103815168 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
103815168
NCBI-ProteinID:
XP_030082315
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MPDEPPRAAPPPLRAARCKPLPEGRAVGRRTPLWLRARFQALLFALGCRIQRHCGKVLFV
GLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKK
DGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLF
PCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSXXXXXXXLDPLQLMEELGQFTSLEGFK
ELLDKAEVGQAYMERPCLDPQDPQCPSSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQ
ELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGAILEAW
QRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLR
WDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLA
HAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVV
VFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHP
SPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAILLPHSDPLGSQVF
APSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKVVVVVLFLAL
LGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAAL
LSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYRNGSED
GALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQA
NFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVRAICQE
AAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPWTAGIIVSI
LAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVRSAAAL
EHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIG
PPPEASLVDNGPCLPPPESIPPCLGPGGLYVRRAPAWPATFPEPSDTEHYTESVGPGSPR
GPFVVPPAPAHILLEAGKDPSFPRITVLKPYKDSLEVQGKKDVSDPQPAAPLPFREPCTT
LPRDSPQPCPPGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPTFS
PEGFTSSERDCLDEPSTSSTTVPDTFEMQNMGHHRAGAWR
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgagcccccccgcgccgcgccgccgccgctgcgcgctgcccgctgcaagccg
ctgcccgagggcagggccgtgggccggaggactccgctgtggctgcgggcccgctttcag
gcgctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtg
gggttgctggtgttcggggcgctggccgtgggactgcgggtggcttccatcgagaccgac
atcgagcacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaag
gagaagttgggcgaggagtctgtctacacctcccagatgttgatccagaccccgaagaag
gatggtgataacatcctgacacaggaggccctgcagctccacctcgaggcggccttggcc
gccagcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctac
aagtcgggtgtccccatcattgagaatggcatgattgagaggatgatagagaagctgttc
ccctgtgtgatcctgacaccgctggactgcttctgggaaggctccaagctgcagggaggc
tcagcctatctcccgggccgcccggacatccagtggagcannnnnnnnnnnnnnnnnnnn
ctggaccctctgcagctgatggaggagctggggcagttcacatccctggaaggcttcaaa
gagctgctagacaaggcagaggtgggacaggcttacatggagcggccctgcctggacccc
caggacccccagtgtccctccagtgcccccaacaagcagagccaacagagccccgacatc
ccggccgaactctcggggggctgccacggcttctccaggaagttcatgcgctggcagcag
gagctgattttaggcggcacgaccaaagactcccagggcaagctgctacgcgctgaggcc
ctgcagaccatgttccttctcatgagcccccggcagctctatgagcacttcaaggatgac
tacgagatccatgatatcagctggagcgaggagaaggcaggagccatcctggaggcctgg
cagaggaagttcgtggagctggcacaggactccatccctcccaacgccacacagagcgtc
catgctttctccaccaccacgcttaacgacatcatgaagtccttctctgacgtcagcgtc
atccgggtggctgggggctacctcctcatgctggcctacgcctgtgtcaccatgctgcgg
tgggactgctccaagtcccaaggggctgtgggcctggctggggtcctgcttgtggctctc
tccgtcgcctctggcctggggctttgctcactgctgggcatctccttcaatgcagccacc
acccaggtcctgcctttcctggccctcggcattggggtggatgacatgttccttttggct
cacgccttcaccgagacgagccagcacatccccttcaaggagcggacgggtgagtgtctg
aagcgcacggggaccagtgtggctctcacctctgtcagcaacatgattgccttcttcatg
gcagccctggtgcccatccctgccctgcgtgccttctccctccaggctgcagtggttgtt
gtgttcaatttcgccatggtgctctttgttttccctgctatcctgagcctggacctgcac
cgccgggagaaacgccggctcgacatcctctgctgcttctacagcccttgctcctcaagg
gtcatccagatccagccccaagagcttgctgacgccaacgacaaccatgcctgccaccca
tctccttatgggcaccctggcatggccaccagcacccagatcaccaccactgtgcaagcc
ttcacccggtgtgacccctcaggccaccacattgtcaccgtcctgccacccacctcccag
gtgtgcacctcacctgccatcctcctgccccacagtgaccccttgggctctcaggtcttc
gccccatccagctccacccgggatctgctgtcccagctggatgaggccaagggtggccgg
gagtgtgtccccctgcccttctgccgctggagccttgctgatttcgcccgggagaagtac
gcccctctccttctgcgcacccggaccaaggtggtggtggtggtgctgttcctggcactg
ctagggctgagcctctatggcaccaccatggtacatgatggcctatacctgacggacatc
gtgccacgggacaccaaggcacacgccttcatctcagcccagttcaagtacttctccttc
tacaacatgttcattgtcactaagggtggcttccactacccgggtgcccaggctgccctg
ctgagcctgcaccaggccttcagcaccgtcaagtacgtggtacgggagggcaaccgcgac
ctgcctaaaatgtggctccattacttccaggactggctgagagggctccaggccaccttt
gacagggactggcaggctgggcgcatcacccatgacagctaccgcaatggctccgaggat
ggggcactggcatacaagctcctcatccagactggcaacaagaaggagcccttcaacttc
aaccagctgaccacgcggcgactggtggatgagaatggcatcatcccccctgacaccttc
tacatctgcctgacggtgtgggccagcaacgaccccctgggctttgccgcctcccaggcc
aacttctaccccccaccccccgagtggattcatgacaagtacgacaccacgggcgagaac
ctgcgaatcccagcagcccagccgctggagttcgcccagttccccttctacctgagcggg
ctgcgtcgcacgtccgactttgtggaggcgattgagagcgtacgggccatctgccaggag
gccgcccagcgccacggcgtgctgagctaccccagcggctaccccttcctcttctgggag
cagtacatcggcctgcggcactggttcctgctggccatcagcatcctgctggcctgcacc
ttccttgtctgcgccttgctgctgctcaacccctggaccgccggcatcatcgtctctatc
ctggccatgattgctgtggaattgtttggcatcatggggctgatgggcatcaagctgagt
gccatccctgtggtcatcctcattgcctcagtgggcatcggtgtggagtttactgtccac
gtggccctgggcttcctgacagctgcggggagcaggaacgtgcgctcagccgcagcactg
gagcacacttttgcgccagtgatggatggtgctgtctccaccctcctgggtgtcctcatg
ctggctggctctgagtttgatttcatcatgagatatttctttgcggtgctgaccatcctg
acgttgctggggctgctcaacgggctggtgcttctgcccgtgctgctctctgtcatcggg
ccaccccctgaggcatccctggtggataatggcccctgcctacccccaccagagtcgata
cccccatgtctgggccctgggggactgtacgtccggcgcgctccagcctggcccgccacc
ttccctgagccctccgacacagagcactacacggagagcgtggggccaggcagcccacgg
ggacccttcgttgtgccccctgccccagcacacatcctactggaggctggcaaggacccc
agcttcccccgcatcactgtgctgaagccctacaaggacagcctggaagttcaggggaag
aaagacgtttctgaccctcagcctgcagcccccctgcccttcagggagccgtgcaccaca
ctgccccgagattccccgcagccgtgcccaccgggcacccggccagccccccctgcagcc
ctgcccacctacagcacccacctgcagggtcctgccggcagctacaccaccgtcacggcc
accgcatcagtgacagtggccctgcaccccacactgcctggctcctaccccaccttcagc
cctgagggcttcaccagcagtgagcgggactgcctggacgagcccagcaccagcagcacc
actgtgcccgacacctttgagatgcagaacatgggacaccacagggcgggtgcctggcgc
tag
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