Serinus canaria (common canary): 103815256
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Entry
103815256 CDS
T05755
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103815256 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103815256 (DHX36)
03012 Translation factors [BR:
scan03012
]
103815256 (DHX36)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103815256 (DHX36)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103815256 (DHX36)
Translation factors [BR:
scan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103815256 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
AAA_23
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
103815256
NCBI-ProteinID:
XP_009087228
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGRGGDGGAAAAAAASSAAGGPGGRGRHPGHLKGREIGLWYARR
QGQKSRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPA
KVKPDAEKAPVRQTPAWEKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQ
RFREKLPSYGMREELVRLINSNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVC
TQPRRISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQS
DKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHC
PMIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRLHWRRGFMQGHMSRPEKEEKEEIYRQ
QWPGYLRQLQGRYSASTISALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNI
STLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITID
DVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRAS
LLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALD
RQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIA
DARRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQF
AEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCT
KTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQK
DKDQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIERPQPVDWNDIKCRDTAVLT
AIIDLITTQENEGVRNFAPRFQGERYS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgtgactggggccgcggtcgcggccggggccggggccgtggc
ggcgatggcggcgccgccgccgctgccgccgcctcctccgcggcgggcgggcccggcggg
cggggacggcaccccggccacctgaagggccgcgagatcgggctgtggtacgcccgcagg
cagggccagaagagccgggatgccgaccggcagcagagagctgtggtgcgcatggacgag
cgcagggaagagcaaatcgtgcagctgctgaattctgtccagactaaaaatgacaaagag
caagaagccatgtcctggtggtctggggatgaagaaggccctgctccagaacagcctgcc
aaagtgaaaccagatgctgagaaagctcctgtaagacagaccccagcctgggaaaaaaca
tccctggatttggatgtggaatttctctgtgaaaaaaccgagcaggatgctgatttagat
gagcaacttaaagaagacttaatgaagaagagatctgatcccagatatattgaaatgcag
aggttccgtgagaagctcccctcatacgggatgagagaggagctggtgaggctgatcaac
agcaaccgcgtgacggtgatcagcggcgagacgggctgcggcaaaaccacgcaggtgacc
cagttcatcctggacgaccacatcgagaggggcctgggctccacctgcaggatcgtgtgc
acacagccccgcaggatcagcgccatctccgtggctgagagagtggctgctgagagggca
gagggctgtggcaatggcaggagcacggggtaccagatccgcctgcagagtcgcttgcca
aggaaacaaggttcaattttgtactgtaccacaggaattgtcctgcagtggctccagtca
gataagcacttgtccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatctt
caatcagatgttttaatgagcattatcaaagatcttctgaatgttcggctggatctgaaa
gtcatactgatgagtgctactttaaatgcagagaagttttccgagtactttgaccattgc
ccaatgattcacatccctgggttcactttcccagtggtggaatatctgctggaagatgtc
attgagaagttgaggtacaccccggagaagacggaccgccggctgcactggaggaggggc
ttcatgcagggccacatgagcaggccagagaaggaggagaaggaggagatctacaggcag
cagtggccaggctacctaaggcagctgcagggcaggtattcagcaagtacaatcagtgcc
ctggaaatgatggatgatgacaaggtggacctggaccttgtagcagcactgatcagacac
attgtgctggaagaggaggatggtgcaattctggtgtttctgccaggctgggataacatc
agcactttgcatgagctcttgatgtctcaagtcatgtttaagtcagataggtttattatc
atccctttgcattcactgatgcctactgttaaccagactcaggtgttcaagaagaccccg
ccaggagtgaggaaaattgtgattgcaaccaacattgcagaaaccagcatcacaattgat
gacgtcgtgttcgttatagatggggggaagataaaggagactcactttgacacgcagaac
aacatcagcaccatggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggt
cgagcaggaagggttcagccaggccattgttaccatctgtacaacgggctgcgtgccagc
ctgctggatgattatcagttaccagagatcctgaggacacccttggaagaactctgctta
caaatcaagatcctgaggcttggtggaattgcctattttctgagcaagctgatggacccc
ccgtctcgtgatgctgtgatgttggccataaatcacctcatggagctgaatgctctggac
aggcaggaggagctgactcccctgggtgtgcacctggcacggctgcctgtggagccacac
attgggaagatgatcctgtttggagccttgttctgctgcctggaccccgtgctgaccatt
gcagccagcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgca
gatgcaagaagaaaggagctgtcaaagaactcaaaaagcgaccatctgactgtggtgaat
gccttcactggctgggaagaggctcggagttgtggtttcaggaatgagaaggactattgc
tgggaatatttcctgtcctcaaacaccatgcagatgctgcataacatgaaagggcagttt
gctgagcatctccttgcagctggatttgtgaatagtagaaaccccaaggatcccaaatcc
aacaccaactcaggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatccc
aaagtggcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaagtgtgcacc
aagacagatggatcagttaatatccatcccaaatcagtgaacgtggaggagacagagttc
cattataactggctggtgtaccatttgaagatgaggaccagcagtatttacctgtatgat
tgtacagaggtgtctccatactgcctcttgttctttggaggggatatatccattcagaag
gataaggaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaaaaa
atagcaaacttggtcaagaaattgagaaaagaacttgatgatcttctacaagagaaaata
gaaaggccccagcccgtggactggaatgatatcaaatgcagggacacagcagtgctgacg
gccatcatagacttgatcaccacgcaggagaacgagggcgtcaggaacttcgcgccgcgc
ttccagggcgagcgctacagctga
DBGET
integrated database retrieval system
