Serinus canaria (common canary): 103815461
Help
Entry
103815461 CDS
T05755
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04136
Autophagy - other
scan04140
Autophagy - animal
scan04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103815461 (ATG16L1)
04136 Autophagy - other
103815461 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103815461 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103815461 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
scan03029
]
103815461 (ATG16L1)
Membrane trafficking [BR:
scan04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103815461 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
103815461 (ATG16L1)
Mitochondrial biogenesis [BR:
scan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103815461 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_IFT140_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
Fez1
INO80F
HTH_6
WD40_like
Lipoprotein_6
Peptidase_M15_4
V_ATPase_I
HEF_HK
FUSC
WH_CYT4
Motif
Other DBs
NCBI-GeneID:
103815461
NCBI-ProteinID:
XP_009087496
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSISNIFGLSESPLLGHQSSDTAR
RRSLSSFPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVKELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVKQ
TFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVT
WSPSGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccgggttccccccctggaagcggcacatcgcggaggag
ctgcggcggcgggaccggctacagcgccaggctttcgaggagatcatcgcccagtataac
aagctgctggagaagtcagaccttcatgcagtgctggctgataaacttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagcccaggacatgatggcacatggaacgacgct
cagctgcaggaactggcccagctgaagataaagcaccaagaggagctgactgagctgcac
aagaaacgtggcgagctggcccagtctgtaatcgatttgaacaaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagccaagattgcagagtatttgcagaagatttccgaa
ctggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
accctgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaacta
aggaaaactactgaggacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggcgacgccaggccaggctg
cagaaggagctggcagaagctgccaaagaacccttgcctgttgaaccggatgatgacatc
gaagtgcttgcagatgaaacctctgacacagctgaggaaacctctccagtgcgagctgtc
agccggacatccagtaagcgactctcccagccagctggaggccttctggactctatcagt
aatatctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgccagg
aggcgttctctgtcctcattccctgcacctcaggataatgcagagccacatccaggtgcc
agtaaagaagtgagagtgcccactactgccatttgtgtctttgatgcacatgatggggag
gtgaatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggaccgg
agggttaagctttgggaagtctttggagataggtgtgagcccaaaggttccctctctggc
agtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcttagcagct
tcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacaccctt
acaggtcacagtggtaaagtgctgtcagccaagttcttgctggacaatgcacgtattgtt
tcgggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgtataaaa
acagtgtttgcaggatctagctgcaatgacatcgtgtgtactgagcagtgtgtaatgagt
ggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaagaa
ctggagttgcttggaagaatcacagctctggacctgaacccggagcgaacagagcttctg
acctgttcccgtgatgatctactcaagatcattgatctgcgcgtcagtgctgtcaagcag
acgttcagtgcccagggattcaaatgtggctctgactggacaagagttgtgttcagccct
gatggtaactatgtggctgctggctcagctgatggggccctgtacatttggaatgtgctt
actgggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtcacg
tggtcaccatcgggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtgctgtgg
tctgagttctga
DBGET
integrated database retrieval system
