Serinus canaria (common canary): 103815523
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Entry
103815523 CDS
T05755
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103815523 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103815523 (WDR33)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103815523 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Collagen
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
103815523
NCBI-ProteinID:
XP_009087583
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWSDGRDSRVMPDRRGPHPDFHDDFDRPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGR
DHGARGRGRGALRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPAN
RERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAQKS
GRSSSLDGDHHDGFHREEAFGGGPGAGNNPSRGGRSSSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagatcggctccccgccgcgcttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctcttctacaagcggcccgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgaggaaagctgtcaacagaaagaccatagactacaac
ccttctgtcatcaaatatttggagaatagagtgtggcagagagaccaacgagatatgcga
gcaatccagcccgatgcaggatattacaatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtgaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaaccaagggattagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactacacgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctctgcaagctcttcgacatccggaacctg
aaggaagaacttcaggtcttcaggggccataagaaagaggccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggagggtctgatgggtccttgctcttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctgtgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgagagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggggtggaatatgctccaggagatgatttggagcccaacagc
ctggcagttattcctgggatgggaatacctgaacagttgaaaatagctatggagcaggag
cagatggggaaagatgagtccaatgacattgagatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctcca
ccacctgagccattgaatgatagaaaggaggatattaagctggaggagaagaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaagtgcagccaccacctcca
ggaggatctctccatggacctcagcctttcccagggcaaggcccgatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaatggggcctcaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaggggcctccccaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacatccgggccctcacgggccgatggggcccccaggcccacagggcagtgct
ggccctcagggacacttgggaccgcagggcctgcccgggtcccagactcatttaggaccc
cagggcccacctggcccacaaggtcacctgggtcctcagggtccccctggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatctcaaggcatgcagggccccatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccagggcccagagataaccagggacctaatccacaaggg
atgatgatgggtcacccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggtccccaggagatgcggggccttcagggacccccgcctcaaggctcaatgctggga
ccgccacaagaaatgcgtgggccacccggtccccagggccagcagggacctccacaaggc
tccttggtggggcctcaaggaaacatgcaaggacctcagggacagccaaacccttcgagg
gggccgcacccttcccagggccctctgcccttccagcagcagaaaacgcctcttttgggg
gatgggcctcgcccccccttcaatcaggatggacagaacccgggtcctcctccgctgata
ccaggcctgggccagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggt
cttaataaaggcgatgcccgtgggccacccaaccatcacctgggcccgctgtcggacagg
cggcacgagcagaacagcggcggccccgagcacgggcctgagaggggtctgttccgaggg
ggccaggactggagtgatggcagggacagcagggtcatgcctgacagacggggacctcac
cccgacttccacgatgacttcgatcggcccgatgacttccgggatgatttccaccctgac
aagagatttggccatcggttacgagagttcgaggggagaggaggcccgccattgcaagat
gagaaatggagacgaggaggacctgggcctccctttcctcctgatcacagggaatttgaa
ggaggtggttccaaccgggggcctcctggtgcttgggaaggacggagaccttcagatgac
agatatccacgggatcccgaggatgcacgcttccgaggaaggcgagacgagagcttccga
agaggaggaccctcgagacacgagggccggggacccaggggcagagatggctttcctggc
cctgaagattttgggccagatgatgcttttgactctccagatgaaaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctctgagaggagctcggaagggtttgctt
cctactccagatgaattcccacgctttgaaggagggaggaaaccagaatcctgggatgga
aacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagccaac
agagaacgctcctcttcactccagggcatggacatggcctcactgccaccacggaaacgt
ccctggcacgatggaccaggaacctctgaccacagggacatggatgctccaggtggacct
ccagaggagaggggcaaaggacgaggaaattcgggaccttcacagagagcgcagaaatct
gggaggtccagttctctagatggagaccaccacgatggattccacagggaggaagccttt
ggtggaggccctggggcaggcaataacccttctcgaggaggaaggagcagcagcaattgg
ggaagaggaaataacatgaactctggccagtccaggagaggaggatctcggggtggacga
ggccgatag
DBGET
integrated database retrieval system
