Serinus canaria (common canary): 103815649
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Entry
103815649 CDS
T05755
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103815649 (TRPC1)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103815649 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
103815649
NCBI-ProteinID:
XP_030083148
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAVFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagtgcggacccgtccgcctcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaggagactacgctggacgagaagcttttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagctcg
ggtgaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttactataactatt
gaaaatgaaaacttggacatactacagctgcttttggattatggctgccagtcctcggat
gcacttttggtggctattgactcggaagtggtgggagctgttgacattctacttaatcac
cgacctaaacgatcctccaggccaaccattgtgaaattaatggaacgcattcagaaccca
gagtactcaacaaccatggatgtggcaccagtaattttagctgctcatcgtaacaactat
gaaattctcaccatgctcttgaagcaagacatatcattacccaaacctcatgctgtgggc
tgtgagtgcacactgtgcactgccaagaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttatcggtgtttggccagtcctgccttgataatgttgacagaggaggat
ccaatcctaagagcttttgaacttagtgcagacttgaaagaattaagtcttgttgaggtt
gagttcagaaatgattatgaggagcttgctcagcagtgcaaaacctttgctaaagattta
cttgcacaagcacggaattcccgggagctggaagtgattctgaatcacacctccagtgat
gaacatgtagacaagagaggattgttggaggagaggatgaacttaagccgcttaaaactt
gcaataaagtataaccaaaaagagtttgttgcccagtccaactgccagcagtttctcaac
acggtgtggtttgggcagatggccggctatcggcgcaagcacacctgcaagaagatcctg
actgttctgatggttggcattttctggccagttctgtccctctgttacttgttagctcct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttctgttattacttaatttgtactcgcttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggcttatt
ggaatggtgtggtcagatgttaagaggctctggtatgatggtttagaagattttttagaa
gagtcccgcaatcagcttagttttgtcatgaattccctgtatttggcaacttttgccctc
aaagtcgttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catccgaccctagtggcagaaggtctttttgcctttgccaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctccattctgggaccactgcagatttcaatggggcag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacccaactttatgacaaaggatttactgtaaatgaagaaaaggactgtgcg
ggcattttctgtgaacagcagagcaatgacacattccattcgtttattggtacatgtttt
gctctcttctggtacatattctccctggcacatgttgcagtctttgtgacacgttttagc
tacggtgaagaattacagtcttttgttggtgctgttattgttgggacctacaacgtggtg
gttgtgatcgtattaacaaaactccttgtggcaatgcttcacaaaagttttcagctgata
gcaaatcatgaagataaggagtggaagtttgctcgtgccaagctttggcttagctacttc
gatgataaatgcacactccctccaccttttaacgttataccctctcccaagacaatttgt
taccttttcaacagtctcagtaaatggatctgctctcatacatcgagtggcaaagtgaaa
cgtcagaacagtctcaaggaatggagaaatctgaagcagaagagagatgagaattaccaa
aaggtgatgtgctgcttagtccaccgttacttgacctccatgagacagaagatgcagagt
acggaccaggccactgtggagaacctcaatgaactgcgacaggacttgtcaaagttccgc
aacgaaatgagagacctgcttggctttcgaacttccaaatatgctatgttttatccaaga
aactaa
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