Serinus canaria (common canary): 103815657
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Entry
103815657 CDS
T05755
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04382
Cornified envelope formation
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
scan04518
Integrin signaling
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103815657 (COL4A4)
04518 Integrin signaling
103815657 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103815657 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103815657 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103815657 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103815657 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103815657 (COL4A4)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103815657 (COL4A4)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103815657 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103815657
NCBI-ProteinID:
XP_030082948
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MALTKDSFERIKWLITAAWWLLIVFSTQGIDGGGYAYFDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGKPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGREGPRGKHGLDGCNGSRGDPGFPGENGYMGPRGPYGIPGQKGEKGNSVYILHFGKGLP
GERGDPGPPGMPGPRGSRGTTGPSGYPGHPGLPGVPGYPGLPGEQGNPGIGVDGQKGEPG
DIGLPGPPGSPLLVGPPGAQLFKGQKGQKGLPGVTGYRGPPGPKGILGRGEKGEKGLPGF
PGLQGHPGSYGPAGFPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPLLPIK
GPRGDPGFPGPVGEMGSVGPIGPSGLLGRPGYDGTSLPGLPGVSGAPGPQGFQGDPGLPG
TGQLIPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGMPGEPGPKGQIGLPGRKGAKGE
KGSQGLCSCGAGPPGPRGVQGPPGTPGRKGQMGYPGRHGEKGDPGLSGAVGSPGLPGTPG
SAGQHGEKGEKGDPGRVRIKGLKGERGPTGLPGFPGQRGPDGRDGELGLPGEKGAEGDSG
VAIPGDKGFPGLPGPPGVKGQMGLPGLGLPGSPGARGSPGDFGDMGNVGPPGPKGQKGET
VCITSPYPGNPGPPGFKGVQGQKGLKGLAGHPGPNGFDGQKGQRGRPGAGIPGPEGFRGT
AGDPGDEGERGSTIDGKNGLPGPPGTDGQKGLPGDTTYGPPGIPGNRGLPGPPGAQGARG
NPGIPGLQGQPGTPGFPGAKGFRGPEGDVGAPGCPGFPGSPCVPGLPGPPGLRGVMGLPG
PQGLPGFKGQRGDRGQAGPPGIKGLKGSLGSRGLPGPPGSRGPPGLPGNKGPVGFPGQTG
SKGIQGPQGFPGLPGIQGPMGIFGVKGEEGKMGLPGPSGECGDMGIKGERGPPGDSGCVN
LRLEKGQIGEPGFPGEHGLRGERGEKGNTGFRGTRGFPGKNGVPGLPGDQGDTGVMGFPG
SRGLPGPKGLQGMTGFQGEPGDQGDVGLPGNPGYPGLTGSKGCKGKRGDPAPLLGTHGQK
GPLGDPGLPGLRGFPGEKGLPGIQGQSGRPGSKGDPGYPGPPGLPGATGPQGLPGEPGEK
GKPGILGHPGLQGLPGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYSGEIG
PKGDRGEPGWPGIAIPGPPGERGFPGFPGRRGPVGPTGPMGRSPDSASPGPLGDQGLPGL
DGIRGDPGNPGPPGETIFVRGDPGDSGIRGAPGNPGPRGQQGARGPPGSQGREGPKGPMG
VHGPQGPPGALGQPGDQGFPGRPGPRGPTGFTGDPGEPGKVDDSCPTIPGPPGEAGQRGE
DGSAGLPGPIGHPGPQGIKGEEGSYGLPGEDGLPGAPGPPGDQGSRGEQGYAGPQGPPGQ
TGVPGQPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFSTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPVVPLSEEEIQPYISRCAVC
EAPAQAVALHSQDQSIPPCPPNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgatagttttttcaactcaaggaattgatgggggaggatatgcatattttgatcca
tgtgggggacaggattgttccgtttgtcggtgctttccagaaaaaggatcaaggggtcag
cctggtgagctgggagctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctgccaggggagaaaggacagagaggtgagaatgggaagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtttagatggtgttcctggcctc
ccaggaagggaaggacccagaggcaagcatggtttggatggctgcaatggctcgagggga
gacccaggattcccaggagaaaacggttacatgggaccaagaggtccttatggaattcca
gggcaaaaaggagaaaaaggaaattcagtgtatattttacattttggaaaaggacttccg
ggagagagaggtgatcctggaccccctggcatgcctggacctagggggtcaagaggtaca
acaggcccatctggatacccaggccatccaggcttgcctggtgttccaggctaccctggt
ttgccaggtgaacagggaaatccagggattggagtggatggacaaaagggggagccgggg
gacattggactgcctgggccacctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggacaaaagggccaaaaaggattacctggagtaacaggatacagagggcca
cctggacccaaaggcatacttgggagaggagaaaaaggtgaaaaaggccttcctggattc
cctggattgcagggtcatcctggttcttatggacctgcaggttttcctggaatgaagggt
gaaacagggtttgctggttttcctggacaacctggctatccaggcattcagggggatcca
ggagaaaaagggcccccaggtcctcctggagctgttggaactccacttcttcctataaaa
ggtccacgaggagatcctggatttccaggtcctgttggtgaaatggggtcagttggacca
ataggtccttcaggccttctaggaagaccaggatatgatggaacaagtcttcctggcttg
ccaggagtaagtggggcaccaggacctcaaggctttcaaggggaccctggtttgcctgga
acaggtcaattaatcccaggaagaccgggatttcctggaccaccaggcctaccagggcag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgacagagggatgcct
ggagaacctggaccaaaaggtcagattggccttccaggaagaaaaggggcaaaaggagag
aagggaagtcaaggcctctgctcatgtggtgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggcactccaggaaggaaaggacaaatgggataccctggaagacatggagaa
aagggcgacccaggcttatctggtgcagtgggatcaccagggctccctgggactcctggt
tctgctggacagcatggggaaaaaggagagaagggtgatccaggaagagttagaataaaa
ggattaaaaggtgaaagaggacctactgggcttccaggatttccaggccaaagaggtcct
gatggcagagatggggaactaggattgccaggggaaaaaggagccgagggcgattctgga
gtagcaattccgggtgataaaggattccctgggctcccgggacctcctggggtaaaaggc
cagatgggattgcctggtttggggcttcctgggtcaccaggagccagaggtagccctgga
gactttggtgatatgggtaatgttgggccacctggtccaaaaggtcagaaaggtgaaact
gtctgcattacatcaccatatcctggaaatccaggtcccccaggttttaaaggtgttcaa
ggacaaaagggtttaaaaggactcgctgggcatcctggaccaaatggctttgatgggcaa
aaaggccagcgaggaaggccaggggcaggaatccctgggccagaaggctttcggggcaca
gccggtgatcctggtgatgaaggtgaaagaggatctacaattgatggcaaaaatggcctt
ccaggtccacctggcacagatggtcagaaaggtcttccaggtgacaccacttatggccct
ccaggaatcccaggcaacaggggactgccaggaccccctggtgcacagggagcaaggggt
aatccaggcattcctggacttcaaggacaacctggtaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgatgtaggagcaccagggtgtccgggcttccctggctca
ccatgtgtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccagga
cctcaaggtttaccaggctttaaaggtcagaggggagacaggggccaggctgggccccct
ggaatcaaaggtctcaaaggctctctgggctcacgaggtctcccaggtcctccaggctca
cgaggtcccccaggacttccaggaaataaaggacctgttggcttcccaggacaaacagga
agcaaaggcattcaaggaccccagggattcccaggactcccaggaatacaagggccaatg
ggaatctttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctagtggagaa
tgtggagatatgggaataaaaggtgagagggggcctccaggagacagcggctgcgttaac
ctccgacttgagaagggccagatcggggagccagggtttcctggggagcatggattgaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcacacgaggatttccaggaaag
aatggtgttccaggactaccaggtgaccaaggtgacactggagtgatggggtttccagga
tcacggggattgcctggaccgaagggccttcaaggaatgacaggttttcaaggagaacca
ggtgaccagggtgatgttggcttaccaggaaaccctggatatccaggactgactggctcc
aaaggatgtaaaggcaagagaggtgacccagctcctctgcttggtacacacggtcaaaaa
gggcctctgggagatccaggattgccaggacttcgtggatttccaggggagaagggttta
ccaggtatccaaggacagtctggaagaccaggctccaagggtgacccaggatatccaggg
ccacctggattaccaggagctacaggtcctcaaggattgccaggagaacctggagaaaaa
gggaaacctggaattttgggacatccaggattgcaagggttgcctggatcccaaggcaga
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaagggt
tctgcaggagctccaggtcagagtgagacagggcctccaggatactcaggagaaattgga
ccaaaaggagacagaggtgaacctggatggcctggtattgctattccaggcccccctgga
gaaaggggattcccaggatttccaggtagaagaggacctgttggacccactggacctatg
ggacgatctcctgatagtgcctcccctggtcctctgggtgatcaaggattacctggttta
gatggcatcagaggtgatcctgggaatcctggtcctcctggagagaccatctttgtgcga
ggagatccaggtgatagcggcattcgaggggcaccaggtaatcctgggccacgaggacaa
cagggagccagaggccctccagggagccaaggaagagaaggcccaaagggtcctatgggg
gtccatggcccacagggtccacctggtgctttaggacaaccaggagaccaaggttttcca
ggaagaccaggtcccagaggtcccacaggtttcacaggtgaccctggtgaaccaggcaaa
gtggatgattcatgccctacaatcccagggcctcctggggaagcagggcaaagaggagag
gatggctctgcaggattaccagggccaataggccaccctggaccccaaggcataaaaggg
gaagaaggatcatatggcctgccaggtgaagatgggttacctggggcacctggaccacca
ggcgaccaagggagccgaggagagcaagggtatgctgggccacaaggtccacctggccag
actggtgtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgctcgtc
cttcacagtcagtcagacagagaaccactctgcccacaggggatgccaaagttatggact
ggctatagtctgctgtacctggagggacaagaaaaagcccataatcaagatcttggtctg
gcagggtcgtgcctgcctgtgtttagtaccatgccatttgcctactgcaacatcaaccag
gtgtgttactatgccagccgcaatgacaaatcctactggctgtccagcgctgccccgctg
cccgtggtgccgctgtccgaggaggagatccagccctacatcagcagatgcgccgtgtgc
gaggcccctgcacaggccgtggcactgcacagccaggaccagtccattcccccctgccca
cccaactggaggagcctttggataggatactcttttttgatgcacactggatctggtgac
cagggtggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagca
ccattcatcgagtgccagggccagcggggaacgtgtcagttcttcgctaatgaatacagt
ttctggctgaccaccgtgatgcctgagctgcagtttgcatcagcccccctgtcagggact
cttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggtatgcctgaagcat
ggctaa
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integrated database retrieval system
