Serinus canaria (common canary): 103815775
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Entry
103815775 CDS
T05755
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103815775 (DDX3X)
03041 Spliceosome [BR:
scan03041
]
103815775 (DDX3X)
03036 Chromosome and associated proteins [BR:
scan03036
]
103815775 (DDX3X)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103815775 (DDX3X)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103815775 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
103815775 (DDX3X)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103815775 (DDX3X)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103815775 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103815775
NCBI-ProteinID:
XP_009087866
UniProt:
A0A8C9NDR5
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSTSKGRYIPPHLRNREASKQGFDSGGWSS
RRDKDAYSSFGARSDRDSKSSFFDRGTGSRGGRYEERGRGGDYDRSGFGRFDRGGGNSRW
CDKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDM
GEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGP
GDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIG
QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ
DTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPDK
RSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQF
RSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNE
RNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSS
GFGSSSSSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactctcagagtgaaggaagctctacaagtaaaggccgatacattcct
cctcacttgcggaacagggaagcttcaaagcagggtttcgatagcggtggctggagctcc
agacgagacaaggatgcctacagcagcttcggtgcgcgctccgaccgcgactccaaatcc
agcttcttcgaccgcgggaccggctccagaggagggagatatgaggagcgtggcagaggc
ggggactatgaccggagtggcttcggcagatttgaccgtggcggcgggaacagccgctgg
tgtgacaaatcagatgaggatgactggtctaagcctctcccgccgagtgaacgcctagaa
caggaactgttttcaggaagcaatactggcattaactttgagaaatatgatgatattcct
gttgaagcaacaggcagcaactgtcctccacatattgaaagtttcagtgatgttgacatg
ggagaaattatcatgggaaacattgaactcacacgctacacccgtcctactccagtccag
aaacatgcaatacctattattaaagaaaagagagacttaatggcctgtgctcagacaggg
tctgggaaaacagctgcatttcttctaccaatactgagccagatatatgcagatggccct
ggtgatgccttgagagcaatgaaggagaatgggaggtatgggcgccgtaagcaatatcca
atctcactggtcttggctcccactagagaattggctgtgcagatctatgaggaagccaga
aagtttgcataccgctccagagttcgcccctgcgttgtatatggtggtgcagacattggc
cagcagatccgtgacttagaacgtggatgtcacttgcttgtagcaactccaggacgactg
gttgatatgatggagagaggaaagattggactggatttctgcaagtacctagtccttgat
gaagctgacagaatgcttgatatggggtttgaacctcaaattcgtcgaattgttgaacaa
gatactatgccaccaaagggggttcgtcacaccatgatgttcagtgcaactttccccaag
gaaatccagatgcttgctcgtgacttccttgatgaatacatctttctggctgttggcaga
gtaggttctacatctgagaacatcacacagaaagtagtatgggtggaagagccagacaaa
cgatcgtttctgcttgacttgctaaatgccacaggtaaagattccttgactctggtgttc
gtggaaactaaaaagggggcagatgctctagaggacttcctgtaccacgaaggctatgcc
tgtacaagtatccacggagatcgctcccagagggacagagaggaagcactgcaccagttc
cgctctggcaagagccccattcttgttgccacagcagtagcagcaagaggactggatatc
tcaaatgtaaagcatgtcataaatttcgacttgccaagtgacattgaggagtacgtacat
cgtattggccgtacaggccgtgtaggaaaccttggtcttgccacttcattcttcaatgag
aggaacataaacattacaaaggacttgcttgatctccttgtggaggctaagcaagaagta
ccatcgtggctggagaacatggcctatgagcagcatcacaaaggaggaggcagccgtggg
cgatctaagagcagtcggttcagcggaggcttcggagccagggactaccggacgagcagc
ggcttcggcagcagcagctccagcagcagccgctccaccagcagccgcagcggcgggagc
ggcagcaggggcttcggaggtggtggttatggaggcttctacaacagtgatggatatgga
ggaaactataactcccagggggtggactggtggggcaactga
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