Serinus canaria (common canary): 103815954
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Entry
103815954 CDS
T05755
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X2
KO
K10373
tropomyosin 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04260
Cardiac muscle contraction
scan04261
Adrenergic signaling in cardiomyocytes
scan04814
Motor proteins
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103815954 (TPM1)
04820 Cytoskeleton in muscle cells
103815954 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
103815954 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
103815954 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scan04812
]
103815954 (TPM1)
04147 Exosome [BR:
scan04147
]
103815954 (TPM1)
Cytoskeleton proteins [BR:
scan04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
103815954 (TPM1)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of microglial cells
103815954 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
ERM_helical
Laminin_I
CENP-F_leu_zip
DUF3450
DUF745
ATG16
Lebercilin
GAS
DUF4200
DUF1664
ADIP
XhlA
MAD
Suppressor_APC
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
103815954
NCBI-ProteinID:
XP_009088081
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagctggag
gacgagctggtggctctacaaaagaagctgaaggccactgaggatgagctggacaaatac
tccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggccacagat
gctgagagtgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgggctcaggagcgcttggccactgccctgcagaagctggaggaggctgagaaggctgca
gatgagagtgaaagaggaatgaaggtcattgaaaacagagcccagaaggatgaagagaag
atggaaatccaggagatccagcttaaagaggctaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgtaagctggtgatcattgagagtgacctggagcgcgctgag
gagcgtgctgagctatcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaagaagacaag
tatgaagaggagattaaagtcctgactgacaaactgaaggaggctgagacccgtgctgag
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagagaaagtg
gcgcatgccaaagaagaaaaccttaatatgcatcagatgctggatcaaactttactggag
ttaaacaacatgtga
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integrated database retrieval system
