Serinus canaria (common canary): 103816201
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Entry
103816201 CDS
T05755
Symbol
MEX3B
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103816201 (MEX3B)
04121 Ubiquitin system [BR:
scan04121
]
103816201 (MEX3B)
Enzymes [BR:
scan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103816201 (MEX3B)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103816201 (MEX3B)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103816201 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
103816201
NCBI-ProteinID:
XP_030084532
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSIYDNEP
RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKED
VAMARREIISAAEHFSMIRASRNKNTALNGTVPGPPNLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDEN
DFHANGTDVGFELNGTGSLWSKPTPPSITPTPGRKPFCNYRNDSSSSLGSASTDSYFGGG
TGAGGSARLADYSPPSPALSFSHNGNNNNNSANGYVYGGGGGDVLSSPDCCSELPFDSPP
GFDLAPAPPPGAALLWPQFERGPAAPPSPAPSPAAAAAFPGAAPANANXALLVSGPRRGA
APPPARLSPPLHGSAAGTEHPLARRVRSDPGGRLLAASYPLYANGLGAHLPGLPSDSSAS
SSSSSSSSSSSSCSSSGVRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKTEP
QCPVCHSAVTQAIRIFS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctttttgcagacatggagaggaacgggagcggcggcggcggcggtggt
ggtggtggtggcgggggagagaccctggatgaccaaagagcccttcagatcgccctggat
cagctctccctgctggggctggacaacgacgagacgggctccatttacgacaacgagcct
cggaaaaagagcgtgaacatgactgaatgcgtcccggtgcccagctcggaacatgtcgct
gagatagtggggagacaaggttgtaaaatcaaagctctgcgggcaaagaccaacacctac
atcaagaccccggttcgcggggaggagccgctctttgttgtgacgggcagaaaggaagat
gtggccatggcccgcagggagatcatctctgcggccgagcacttctccatgatccgagcc
tcgcggaacaagaacacagccctgaacggcaccgttcccggccccccgaacctgcccggc
caaaccaccatccaggtgcgggtgccttatcgcgtggtgggcttggtcgtggggcccaag
ggggcgaccatcaagcgcatccagcagcagacgcacacgtacatcgtgaccccgagccgg
gacaaggagccggtctttgaggtgacaggcatgccagagaacgtggaccgggcccgggag
gagatcgaggcacacatcgccatgcgcaccggcggcatcatcgagctgacggacgagaac
gacttccacgccaacggcacggacgtgggcttcgagctgaacggcacgggcagcctctgg
agcaagcccacgccgcccagcatcacacccaccccgggccgcaaacccttctgcaactac
cgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcgggggcggc
accggggcgggcggcagcgcccgcctggccgactacagccccccgagcccggcgctgagc
ttctcgcacaacggcaacaacaacaacaacagcgccaacggctacgtgtacggcgggggc
ggcggcgacgtcctctcctccccggactgctgctccgagctgcccttcgactcgccgccc
ggcttcgacctggcgcccgccccgccgcccggggccgccctcctctggccgcagttcgag
cgcggccccgccgcgccgccctcgcccgcgccctcgcccgccgccgccgccgccttcccg
ggcgccgcgcccgccaatgccaacntggcgctgctggtgagcggcccccggcgcggcgcc
gccccgcccccggcgcggctctccccgcccctgcacggcagcgcggccggcaccgagcac
ccgctggcgcgccgggtgcgcagcgaccccggcgggcggctgctggccgcctcctacccg
ctgtacgccaacgggctgggcgcccacctgcccgggctgccctccgactcctccgcctcc
tcgtcctcctcctctagctcctcgtccagctcctcctgctcctcctctggcgtgcggcgg
aagggcagccgcgactgctccgtgtgcttcgagagcgaggtgatcgcggcgctggtaccc
tgcggccacaacctcttctgcatggagtgcgccaaccgcatctgcgagaagacggagccg
cagtgccccgtgtgccacagcgccgtcacccaggccatccgcatcttctcctga
DBGET
integrated database retrieval system
