Serinus canaria (common canary): 103816269 Help Entry 103816269         CDS       T05755                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism scan  Serinus canaria (common canary) Brite KEGG Orthology (KO) [BR:scan00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:scan03400]     103816269 (SPG11) DNA repair and recombination proteins [BR:scan03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      103816269 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  103816269 NCBI-ProteinID:  XP_030084353 LinkDB All DBs Position Unknown AA seq 2356 aa AA seqDB search MAALRHRPAGRGASAWAGRPPANGSRGGAGEDQWAGSPGPARVTLGGHMVALTRGASSIC FGSFRAEPKAVLVLSIRSVRQQQPDMLHNLPECFTFSFLWDSSEDDGSQSNKTKLLALAQ SHDLFVYEFSVEDGKHNPNPLHSCEAETLKKLLEAKNISLPSISSVKILSFGNNKCKLLL NQFLLVHLTFPGEGSPPETCGCFPLALPPGAVGRIADSQFCRGILFLLDSAGWIYICDCS DGATLGKVGVALAAGQGPAPVSPLAALAVSPDLSTAVVTNSCHWALAVQLNTYFRQFPEH LFCKRDPENLPVKPAEGLEEDELASSEHSMELLPLPFRTDRSWKAHLSSLWDRVRRRRTA GSPDLVNHLNLPWYQFFTHLEDHDPEVCEDPERMVAFVPRAVTWAASPALQGQPGGAGQQ WAQIPVGAAQEMVKLECKLVTGAKAVFVVQAQDTGLSLALWDFESQDVTCSLFGRSSAYV ECSAELPLCLLLTERGLSLVLFGVTQEEFLTRLMMFGSAGVVDSLCHLNGWERCSIPIHA LEAGLENRQLDTVDLFLKSKESVFSLSAASPGPGHPGGAASQSYLSNLEELRPALNLLCS AIQDNDMEPHSKPFSEQLLNLTLTFLTKQLEEIFVHTEEPDEFLQKAADILTDYIIRLRK FLRRYPHPAVTPGQGAELDEDLPEIEESQEWEKLTPEEVIAEAILSNKIPEAQIFFRRQQ HPAESLQELMQTGLSLAYDCLLKGSTREASELLRNMGLDVRQELHKICLHTQDRHVRELL VKVLQEENYFSEKEKKIIDFVHQVESFYSESFQEKEETQSLSRCSSWRRQQELSGPRAVL GSQLGWGSPRAPRLTLTLSWALCWEQLLQEMVLLPWKPQQELKTCSPEVLWMHLTAQHDW MSICSWIEESEPSQAPCGRAVWPPLSPDIVDRSTLCSPYMRQDILNKLARKGIFVPSELE DFELLLQRLSCLGGVLQNPHPVPKCSSASGLDFHAQFVLHCLEHSLQYLLYTYLDYYSLT PSNCPVLGNKELQEAHPWFEFLVQCRGVASSPRDPKMIFQASLANAQMLIPSSQGGVSSI LLEGRTLLALATTVYGPGGIDQVLQNEDTEKPLKKVDPQLLKMALTPYPKLKAALFPSCT AHGILPPDISLYHLLQSLMPFDPTKLFGWQSTNTLAVSDAWSQLPHFSSPELVSRHAVLE RLDFLFYLLHGRPAFAFGTFLGQQLARSKTPRQLIQQAAREAQLLALSSFGVPSVAAACV CFLELLGQDSLGLRVALRAASLISSHSPSRDSLVEKLTKLADGEKAAAAAVLSSLEEAFW DAIEQQGIKRTSSDCRRQWSLVMQFCKLHKLELSTSFLRECAKSNEWLQFLIQSQLHGHQ PAQVIPLLQDFPAVVQDHLLLALGRLLGAEAGAAGRARAGSLFQTLLQCQEQPSPCRFLL AEGLRAQAPILSVLAACCPGANLISCLCVWIVTSVDDATRAEATAHTQGWAEGPQWDLQD LAAIWKVLLRKQKSKTLLNGFQLFLQDSPLLHILEMYELCMNCKKYKEAKTKLDKFQESL TNLGAAGGAAPAVPPPWLRSQALFLLELMLQQCRTDYELGKLLQLLAAADTLLLDGPHLK RLCALSEALRDSSISISRSILTSCSLEAFQGECSSILEQLQEKGMFSLAREVAALAELPV DSVVTHEVLRDLHHLRDSGQWHQSQTRAEFWEKCNDTFSRHSICSRAAAGFFLHQADSVW DSSGQEKATSMVERQLLLTLAGHWLAKEPGLAVQELQEVERQIWQCRLAERALLPEGSEP CPGALRLGRLAQRFSLARLAALEYFQLWHRDVALVLHCRALALGEAELEQLQPEVRALLR AETSTDTDASSLEDWTPLGCGDDAVVAALKALAEECVHGRSYCRQVLCLYELSKELSCSF GEVSAREPREVLGAILARRGPERGRRAQAFITCQGLPPATVAPLLAQQITQELLASAQGK GQKQAWNPAVESQELLQLAKLCQDHTLVGMKLLDKISSVPRGELSCITELLILAHSLFSL TCHMEGITRVLQAARLLTEEHLAPREEYGLVVRLLTGIGRYNEMTYIFELLHQKHYFEVL MRKKLDPSGTLKAALLDYTKRCRPGDSEKHNMIALCFSMCREIGQNHEAAACTQLKLIEC RPWEESLQDVPNLKKLLLKAVTLFIDAAESYSKDSCVRQALRCRRQTRLITLQLHFLGSG QSTRIINLGRQDLPGAILALPRFYQAAIVAEAYEFLPDWAEVLFQQVITRGDFVYLEEFR QQRPLQPGLFEEVAKKVKQQHAPADAALRNLKRFLTHCEDIYTYYRLAYDHKFYDVVNSL LKDPQTACCLNDLLSN NT seq 7071 nt NT seq  +upstreamnt  +downstreamnt atggccgcgctccgccatcggcccgcgggccgcggcgcttccgcctgggcggggcgacca ccggccaatggcagccggggaggggccggggaggaccaatgggcggggagcccggggcca gcccgggtgactctcggcggtcacatggtggctttaacgcgtggtgcctccagcatctgc tttggcagcttccgcgccgagccaaaagcagtcttggttctgagcatccgcagtgtccgg cagcagcagccggacatgctccataacctccctgaatgtttcaccttcagcttcctgtgg gacagctcagaagatgatggctcacagtccaacaagaccaagctcctggctcttgctcaa agccatgacctgtttgtctatgagttcagtgtagaagatggaaaacacaacccaaatccc ctgcacagttgtgaggcagagacgctgaaaaagctccttgaagctaaaaacattagtctg ccttcaatttcctccgtgaagattctgtcttttggaaacaacaagtgcaaacttctgctc aaccagtttctccttgtgcacctgacctttcctggggaaggctcacccccagagacctgt ggctgcttccccctggccctgcctccaggagctgtggggagaattgcagactcccagttc tgcagggggatcctgttcctgttggacagtgctggctggatttacatatgtgactgctct gatggtgccaccctggggaaggtgggggtagccctggcagctgggcagggcccagcccct gtgtcccccctggctgccctggcagtgtcccctgacctcagcacagctgtggtgaccaac agctgccactgggccctggctgtgcagctcaacacctacttcagacagttccctgaacat ttgttctgtaagagagatcctgaaaatctcccagtgaagcctgcagagggactggaggag gatgagctggccagttctgagcacagcatggagctcctgcccctgcccttccgcacagac aggtcctggaaggcacacctatcctcactgtgggacagagtcaggagaagaagaacagca ggctctccagacttggtgaaccacttgaatttgccttggtatcagttttttacccatctg gaagaccacgatcctgaagtttgtgaggatccagagaggatggtggcctttgtcccccgg gctgtcacgtgggcagcttccccagcactccagggccagcctgggggtgcaggacagcag tgggcacaaatccccgtgggagcagcccaggaaatggtgaaactggagtgcaaactggtg actggagctaaggctgtgtttgtggtgcaggcacaggacacggggctgtctctggccctc tgggattttgagtcccaggacgtgacgtgttccctctttggcagaagcagtgcctacgtg gagtgcagtgcagagctgccactgtgtctgctgctgacagagcgtggtctgtccctggtc ctgtttggggtcactcaggaggagttcctgaccaggctgatgatgtttggcagcgccggg gtcgtggattccctgtgccacctcaatggctgggagaggtgctccattcccatccatgcc ctcgaggcaggtttggagaatcgccagctggacacggtggacttgtttttaaaaagcaaa gaaagtgttttcagtctgtctgcagccagccctgggcctgggcaccctgggggtgctgcc tcccagtcctacctgagcaatttggaggagctcaggccagctctaaacttgctctgctct gcaatccaagacaatgatatggagcctcacagcaaacccttctctgagcagctcctgaac ctcaccctgactttcctcaccaagcagctggaggaaatctttgtgcacacagaggagcct gatgagttcctgcagaaggctgcagacattttaactgactacatcattaggctgaggaag ttcctgaggagataccctcacccagcagtgaccccagggcagggagctgagctggatgag gacctgcctgagatagaagagagccaagaatgggaaaaactgacaccagaggaagtcatt gctgaggccatcctaagcaacaaaataccagaggcccagatcttcttcagaaggcagcag catcctgctgagagtctgcaggagttgatgcagacaggtttgagcctggcctatgactgc ctgctgaagggcagcaccagggaggcctcagagctgctcaggaacatgggcttggacgtg aggcaggagctgcacaagatctgcttgcacacacaggacaggcacgtcagggagctcctg gtgaaagtcttacaagaagaaaattatttttctgaaaaagagaagaaaattattgacttt gtgcatcaggttgaaagcttctattcagaatccttccaggaaaaagaagagactcagtct ctttccaggtgcagcagctggaggaggcagcaggagctctctgggccccgggcagtgctg ggctcccagctgggctggggcagcccccgggccccccggctcaccctcaccctcagctgg gccctctgctgggagcagctgctgcaggagatggtgctgctgccctggaaaccacagcaa gaactcaagacctgcagtcctgaggtgctctggatgcacctgacagcccagcatgactgg atgagtatttgttcctggattgaggagtcagagcccagccaggctccgtgtggcagagct gtctggccccccctgagccctgacatcgtggacaggagcactctgtgcagcccctacatg agacaggacatcctcaacaagctggccagaaagggaatttttgtcccttctgagctggaa gattttgagctgctgctccagaggttgtcgtgcctggggggagtcctgcagaatcctcac cctgttccaaaatgcagctctgccagtggcctggacttccatgctcagtttgtcctgcac tgcctggagcacagtctgcagtacctgctctacacttacctggactattacagtttaacc ccttcaaactgccctgtcctgggtaacaaggagctgcaggaagcacatccctggtttgag ttcctggtgcagtgcagaggggttgccagcagtccccgagatcccaagatgattttccag gccagtctggccaacgctcagatgctgatccccagcagccaggggggtgtgagcagcatc ctgctggagggcaggaccctgctggccctggccaccacagtctatgggcctgggggcatt gaccaggtccttcagaacgaagatactgaaaaacctctaaagaaagttgatccacagctc ttgaagatggccttgaccccttaccccaagctcaaggctgctctcttcccctcctgcact gctcatggaattttgcctcctgacatctctctctaccaccttctgcagtcattaatgccc tttgatcccacaaaattgtttggctggcagtcaacaaacactcttgctgtgtcagatgcc tggagccagctgccccacttctccagccccgagctggtgagcaggcacgccgtgctggag aggctggatttcctgttctacctgctgcacggccggcccgccttcgccttcggcaccttc ctgggccagcagctggccaggagcaaaacccccaggcagctgatccagcaggcagctcgg gaggcccagctgctggccctgagctccttcggtgtcccctcggtggctgcagcctgcgtg tgcttcctggagctgctggggcaggacagcctgggcctgagggtggccctcagggctgcc agcctcatctccagccacagccccagcagggactccctggttgagaagttaacaaagctg gctgatggtgagaaggcagcagcagcagcagttctctcctccttggaagaggccttctgg gatgccattgagcagcaaggcataaagaggacatccagtgactgcagaaggcagtggtcc ttggtgatgcagttctgcaagctccataagctggagctgagcacgtccttcctgagggaa tgtgccaaatccaacgagtggctgcagttcctgatccagagccagctccacggccaccag ccagcccaggtcattcccctgctgcaggatttccctgctgtggtccaggatcacctgctg ctggccctggggaggctgctgggtgcagaggcaggtgctgctggcagggcccgtgcaggg agcctgttccagaccctgctgcagtgccaggagcagcccagcccctgcaggttcctgctg gctgaagggctccgggcacaggcccccatcctcagcgtgctggcagcctgctgccctggt gccaacctcatctcctgcctctgtgtgtggattgtcacttctgtggatgatgccaccagg gctgaggccaccgcccacacccagggctgggcagaaggtccccagtgggacttgcaggac cttgctgccatctggaaagtcttgttgaggaagcagaagagtaaaacacttctgaatggc ttccagctctttttacaggattcccctttgctgcacatcctggagatgtatgagctctgc atgaactgtaaaaagtacaaggaagctaaaaccaaactggacaaatttcaggaaagcctg acaaacctgggggctgcagggggagcggcccccgccgtgccgccgccgtggctgcgctcg caggcgctgttcctcctggagctgatgctgcagcagtgccgcactgactacgagctgggc aagctcctgcagctcctggctgcagcagacaccctcctgctggatggcccccacctgaag aggctctgtgccctcagtgaggccctgagggactcctccatctccatcagccgctccatc ctgacctcctgcagcctggaggccttccagggggagtgcagctccattctggagcagctg caggagaagggaatgttcagcctggctcgggaggtggcggccctggctgagctgcccgtg gacagcgtggtcacacacgaggttctgagggatctgcatcatttaagagactctggccag tggcatcagagccagacacgggctgagttctgggagaagtgcaacgacaccttcagcagg cattccatctgcagccgagccgcagcggggttcttcctgcaccaggccgacagcgtgtgg gactcctcagggcaggagaaggcaaccagcatggtggagaggcagctgctgctcacgctg gccgggcactggctggccaaggagcccgggctggccgtgcaggagctgcaggaggtggag aggcagatctggcagtgccgcctggcggagcgggcgctgctgcccgagggctcggagccg tgccccggggccctgcgcttgggccggctggctcagcggttctccttggccaggctggcg gccctggagtacttccagctgtggcacagggacgtggccctggtgctgcactgcagggcc ctggccctgggcgaggccgagctggagcagctgcagcccgaggtgcgagctctgctgagg gctgagaccagcacagacaccgatgcatccagcctggaggactggacccctctggggtgt ggggatgatgccgtggtggcagcactgaaggccctggcagaggaatgtgtccatggcagg agctactgcaggcaggtcctgtgcctctacgagctctccaaggaactgagctgctccttc ggggaggtgtcggcgcgggagccgcgggaggtgctcggggccatcctggcgcggcggggg ccggagcggggccgcagagcccaggccttcatcacctgccaggggctgccccctgccacc gtggcacctctgctggcacagcagatcacccaggagctgctggcctcggcccagggaaaa gggcagaagcaggcttggaaccctgcagtggagagccaggagctcctgcagcttgccaag ctgtgccaggatcacaccttggttgggatgaagttgctggataaaatctcctctgtgccc cgtggggagctgtcgtgcattacagagctgctgatcctggcccacagcctcttcagcctg acctgtcacatggaggggatcacgcgagtgctgcaggcggctcggctgctcaccgaggag cacctggctcccagggaggagtatgggctggtggtgcgcctgctgacgggcattggcagg tacaatgagatgacctacatcttcgagctgctgcaccagaaacactacttcgaggtgctc atgaggaagaagctggacccgagcgggacgctgaaggcggcgctgctggactacaccaag cgctgccggcccggcgacagcgagaagcacaacatgatcgcgctgtgcttcagcatgtgc cgggagatcggccagaaccacgaggctgccgcctgcacccagctcaaactcatcgagtgc cggccctgggaggagtctcttcaggatgttccaaatttaaagaagctgctcctgaaagct gtgactctcttcatcgatgcagcagaaagttactccaaggactcgtgtgtgcggcaggcg ctgcgctgccgccgccagacgcggctcatcacgctccagctgcacttcctgggctcgggg cagagcaccaggatcatcaacctgggcaggcaggacctgccaggagccatcctggccttg cccaggttctaccaggcagccatcgtggccgaggcctacgagttcctgccggactgggct gaggttctgttccagcaggtgatcaccaggggggactttgtgtacctggaggagttccgg cagcagcgcccgctgcagcccggcctgttcgaggaggtggccaagaaagtcaaacagcag cacgcccctgctgatgctgccctgaggaacctgaagcggttcctcacccactgcgaggac atctacacctactacaggctggcctacgaccacaagttctatgacgtggtgaactccctg ctgaaggaccctcagactgcctgctgcctcaacgacctcttatccaactga

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