Serinus canaria (common canary): 103816457
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Entry
103816457 CDS
T05755
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103816457 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103816457 (CSTF2)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103816457 (CSTF2)
U7-dependent histone pre-mRNA processing factors
103816457 (CSTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
103816457
NCBI-ProteinID:
XP_030084674
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQAI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLER
GQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGA
PMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEP
RVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGP
LNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIM
QVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcggtccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggaacagctgaaggacattttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggccctgcgcgtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctatggggaccctgtaaac
ccagaggatgcccctgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccccagctggcttatgcactgctgcaggcccaggtggtcatgagg
atcgtcgacccagagatagcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcaggcagtgccaggcccagggcctgggccaggaccggggcctggg
ccagggcccaacgcgcagctgaacccacagaacaccccgtcgtcccagccacaggccata
ggcgggatgcacgtcaatggcgctcctcctctgatgcagccacccatgcaggggggagtg
ccagccccgggacagatggcagcccctgtgcagggcccaggccctggccccatggctcca
ggaggtgggatgcagccacaggttgggatgccaggtgcagggccagtccccttggagcgt
ggacaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
gtcggaagagatccccgggggctggagccacgagggctggagccgcgcgggctggagccg
cgcgtgatggaggcgcgggcgctggaggcgcgaggcctggagccgcgggtcctggagcca
cgagtgctggaagccagggccatggaggccagggtcctggagccccggggcctggagcct
cgagggcctggtcccaacccgcgtggcccaatgcctggtgggatacagggtcctgggcca
cttaacatgggagccagtggcccgcaggggccccgccaggttcctaacatggctggagca
ggcatgcagggaggaggcatacctggggcaggagtccagggagctggtcagcctggaggc
tttagccctggacagagccaggtcaccccccaggatcacgagaaggcagcactgatcatg
caggtcctgcagctgacagcagaccagatcgccatgctgcccccagaacagcggcagagc
atcctcattctgaaggagcaaatccagaaatccacaggggcaccctga
DBGET
integrated database retrieval system
