Serinus canaria (common canary): 103816502
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Entry
103816502 CDS
T05755
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103816502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103816502
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103816502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
103816502
NCBI-ProteinID:
XP_030084792
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MATELEPPAAGAVSGTAPLEAEEDEEHWLYGDDTTGKQEDGPISGHTESAHPLQDAPQES
RPVNNEDREMAQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPINTENKITVQQGRTGNAEKEVESSIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERERERERDRERDRDRDRTPTTSEYNNDDERYRYYSRER
SYDFERDYRRSRDRSREREERHRERRHRDKDEGSKHKSSRRKQHESEEGESHRRHKHKKN
KRSKEEKEASEDGAQEGEEQDTKE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggccgccggcgccgtgtcgggcacggcgccgctggag
gcggaggaggacgaggagcactggctgtacggggatgacaccactggtaagcaagaagat
ggaccaatttctggacacacagagtctgctcaccctctgcaggatgctccccaggagagc
cggcccgtcaacaacgaggacagagagatggcccagcacgcccttcccagtggtgaggat
gatgaggatgacagtgacagtgacagcgatgacgatgacgtgaaggtcacaattggcaac
atcaaaacgggagcgccgtcctacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgacttggatgcc
gcagggaatataaatggattgcctgtgatagaagtggatttggattcatttgaagacaaa
ccgtggaggaaaccaggtgctgatctttctgattactttaattatggattcaatgaagaa
acatggaaagcttattgtgaaaagcagcggcggcttcagctggggctggaccctgctcct
cccatcaacactgagaacaagatcacggttcagcagggaagaacaggaaatgctgaaaaa
gaagtggaaagcagcatcatcaaaacagagttcaaaacagacttcttggctctggtggga
ggacgaatgaaggctgggcctcctcccaacaggaagctgggtgggaccattgatgtgatc
gggggccaggcaggcacaatccgcagggtggaagggagacgccgggataagcacgcctcg
gaggaaaaccccatccaggtcctgggagaccatggcagtaagccccagcccccccagcag
ccccagcagccctcccagccccagcagcctcctcagcagcagccgtttgctccaccagca
gggcctccgcctcccccactggccgggcctcctcctccacacttcctgcaccctcctcct
ccagtgacttctgttccacctcccctgcatcctccaggcctgccacctccaggtccaatt
ccagggctgttcccaccacctctggcaccaccaccagctctccttatcccaaccttggat
gggcagccagccagctacaacaacaggcagccacctccctttggctacaactctgcagat
tctggtttcatcagctacccccccatctccacgtcccacacgccctgggtgaccacggtg
gacaagggcacgagcagctccagcagcagccactgggagtactcgggctccaggcgggag
cgggagagggagcgcgagcgggagcgggacagggagcgagaccgggaccgggaccgcacc
cccaccaccagtgaatacaacaatgacgatgagcggtaccgctactacagccgtgagcgc
agctacgacttcgagcgcgattaccggcgcagccgcgaccgcagccgcgagcgcgaggag
cggcaccgcgagcgccgccaccgcgacaaggacgagggcagcaaacacaaatcctcccgc
aggaagcagcacgagagcgaggagggcgagagccaccggcgccacaagcacaaaaagaac
aagcggagcaaggaggagaaggaggccagcgaggacggtgctcaggagggcgaggagcag
gacaccaaggagtga
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integrated database retrieval system
