Serinus canaria (common canary): 103816521
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Entry
103816521 CDS
T05755
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04382
Cornified envelope formation
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
scan04518
Integrin signaling
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103816521 (COL4A5)
04518 Integrin signaling
103816521 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103816521 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103816521 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103816521 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103816521 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103816521 (COL4A5)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103816521 (COL4A5)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103816521 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103816521
NCBI-ProteinID:
XP_030084758
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MERRRRSCSLAAGCLVLLLGCWGPQEAAAAEKFQVFLCIVWSLDFLGIQACHGCTSLSKC
DCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLP
GFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEA
GEIITSLLPGQKGDPGFPGLPGIPGPPGSVGIPGPVGPPGPPGLTGPPGPPGLPGPKGNM
GLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPPGPP
GLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDMGP
PGPPGIVVPRPGIDATVGPKGSKGLPGLPGAKGDRGFSGRPGPPGLPGSPGITTVGPPGP
PGLPGERGQKGDPGLPGVSIPGQPGVEGPQGPPGPPGPPGPPAPSVAPGEGLCEQGPPGP
PGIPGQQGFTGERGQKGDRGDTCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKG
LPGLTGLVGPPGFPGTPGAPGRPGPKGDPGDVLTSPRLKGDKGDPGFPGPPGLPGIDGTP
GRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQG
VSGRPGPPGVPGPKGDPGQTITEPGVPGPPGPPGRIGDPGLPGDPGQPGQRGLPGIPGAK
GEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGEKGERGFGVPGP
PGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGI
GGQGPPGSPGPPGPVGPPGPPGLQGIPGEKGDPGPPGFDIPGPPGDQGAPGYPGPPGLPG
PQGSPGPPGRDGVPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGLKGNSGLPGPPGPPG
PVGQKGIKGEAGLPGPPGTLDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGL
SGPPGVPGLPGIKGDMGLPGQPGPTGPPGLKGAMGEMGLPGPPGLKGSQGLAGRPGQPGP
AGFPGLKGEKGDPGLSGIGIPGPPGPKGDLGLPGYPGSPGSKGIAGNPGLPGFPGSPGAK
GEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIP
GPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGPKGEPGFQGFPGLQG
PPGPPGIPGPPLEGPKGSPGPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGP
PGPPGLTGPKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPTGLTGS
QGLPGPPGPPGLPGTIGRSIVVKGDPGSPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPG
RDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQ
TRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNF
ASRNDYSYWLSTPESMPMSMEPLTGPSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPG
WDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWL
ATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggcggcggagctgcagcctggccgccggctgcctggtgctgctgctgggg
tgctgggggccgcaggaggcggcggcagcggagaagttccaagtgttcctgtgcatagtg
tggagcctagatttccttggcattcaggcttgccatggatgtacatctttatccaaatgt
gattgcagtggagtaaaaggtgaaaagggtgaaagaggattcccaggcttggaaggacag
ccaggtttgcctggatttccaggaccagaaggaccacctggtccaagaggctcaaagggt
gacgatggtcttccagggcctattggacccaaaggaatcagaggaccgccagggcttccc
ggctttccaggaacaccaggacttcctggattgccaggacaagatgggccaccaggacct
cagggtatcccaggatgcaatggaacaaagggagagcgtggattcccaggcagtccaggt
tttcctggtttacaagggcctcctggaccccctgggctgccgggtatgaagggtgaagca
ggtgaaataattacatccttgctaccaggacagaaaggtgacccaggatttccaggtctt
ccaggaatacctggcccccctggctccgtgggaataccgggtccagttggccctccaggg
cccccaggtttgacgggacctcctggtccaccagggctaccaggacccaagggtaatatg
ggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggacctcca
ggaccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcagaaagga
gatcagggtattccaggtgatccaggcccaccaggacttcctgggcctccaggccctcct
ggtcttcccggtggtgtgaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagagga
aagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggtgggcct
ggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaaggtgacatgggtccc
cctggtcctcctggaattgttgttccgagaccaggtattgatgcaacagtgggaccaaaa
ggtagcaaaggattgccaggacttccaggagccaaaggggatcgtggattctctggtagg
ccaggcccacctggcttgccaggatctccagggatcactactgttggacctcctggccca
cctggcttgcctggtgagagaggacagaagggagatccaggtttacctggggtttctatt
cctgggcaaccaggagttgagggaccacaaggaccgccaggaccaccaggtcccccaggg
ccacctgcaccatctgttgctcctggtgaagggttatgtgagcaagggccaccaggtcct
ccaggaattccaggacaacaaggttttacaggggagcgaggccaaaaaggtgaccgagga
gacacgtgcttcaactgcataggaactggagtaactggtcctcctggggagaggggacca
ccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaagggg
cttcctggattaactggccttgtagggccaccaggcttcccaggcaccccaggtgctcct
ggtagacctggtcctaaaggagacccaggagatgtcctgacttctccaagactgaaaggt
gacaaaggagaccccggcttcccaggacctccaggtctccctggcatagatggcactcct
ggacgagatggactgccaggtttgcctggccctaagggggaacctggcagtgttgcattc
aaaggagaaatgggtattccaggtgacccagggataccaggtcttcctggagaaaaaggg
cttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatccaaggt
gtatctggccgtccagggcctcctggtgtcccgggtccaaaaggtgaccctggccagact
attacagaaccaggagttcctggtccccctggtcctccaggaagaattggtgatccaggt
cttccaggagatcctggtcagccaggtcagcgtggtttacctggcatcccaggtgcaaag
ggagagccaggtattcctggcattggacttccaggtccaccaggcccaaagggtttccca
gggactccaggcccacctggagctccaggaactccaggtcgccctgggctggatggacct
cctggaccacctggtttcccaggagagaagggagagcgtggatttggagttccaggacca
cctgggcccccaggccccccaggcataaaaggagttcaaggacctaaaggtgatcctggc
ttcccaggaaaccctggtctcccaggccgggcaggctttgatggaaccccagggcccaaa
ggtgaccctggaccaagtggaccaccaggacttccaggcccaccaggcatccctggcatt
ggtggtcaaggtcctcctggatctccaggacctccaggtcctgttggccccccaggtccc
ccagggctgcaaggcattccaggggagaaaggggatccaggtcctccaggcttcgatatt
cctggtcctccaggtgaccaaggagctccaggatatccaggaccccctggattaccaggg
cctcagggttcacctgggccccctggcagggatggagtacctgggtttccaggtgccaaa
ggtgagatgggtgtcatgggagctcctggtcctccagggcctccaggaactcctggaaga
aatggtctgcctggcttgaaaggtaatagtggattacctggtccaccaggacctcctgga
ccggtgggacagaaaggcatcaaaggtgaagcaggtctgccaggtccaccaggaacactt
gatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggtgttccaggtattcct
ggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccaccaggactt
agtggcccaccaggtgtgccaggattgccaggcatcaagggagacatggggcttcctggg
cagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggtcttcca
ggtccccctgggcttaaaggcagccaaggactagcaggacgtccagggcagcctgggcct
gcaggatttcctggactgaaaggggagaaaggtgatcctggtctttcaggcattggtatt
cctggtccccctggaccaaagggagatcttggcttgcctggatacccaggtagtccaggc
tctaaaggtatagctggaaatcctggtttgcctggatttccaggcagtccaggtgcaaaa
ggagaaccaggccttcctggattcccaggaacaccaggaattccaggaccaaaaggtatt
gagggccctccaggtaatcctggcctgcctggaccacctgggccagtaggtgatattggt
cgtcctggccctcctggtccttcaggggaaaagggacaacctggtcgagatggtatccct
ggaccagcgggtcagaagggtgaaccaggtctaccgggttttgggcgtccaggaccccca
ggactcccaggattgtcagggcagaaaggagaactggggttacctggcccaccaggaccc
cctggacttccaggaccgaagggagaaccaggtttccagggattccctggtctgcagggt
ccaccaggtccaccgggaataccagggccacctctggaaggtcctaaaggtagccctggc
ccaccaggagttccaggaaggccaggtccctcagggcctccaggtccaccaggcccagaa
ggtccacgagggcccccaggcagtggaggacttaaaggggaaaaagggaacccaggtcca
cctggcccacctggcctgactggtccaaagggagatcaaggaccacctggacgccagggg
gatcctggtcgtccaggtctgaatggaatgaagggtgaccctggggttccaggcgttcca
ggattcccaggtatgaagggtcccactggacctgcaggacccactggcctcacgggcagc
cagggactgccgggcccaccaggtccaccaggtttaccaggtaccattggacgaagcatt
gttgtcaaaggtgatcctggttccccaggtcctccaggacagcctgggtccaaagggccg
cctggattgccagggccacagggattgccaggtccaattggtcttcctggtgacccaggg
agagatggacttcctggttttgatggtccagcaggacgaaaaggagagagaggtcttcca
ggccaaccaggttcacgaggaatacaaggacctcctggtcctgatggcttacaaggccca
cctggtcctcctggaacagcttctgttgctcatggattccttataactcggcacagccag
accagggatacaccactatgtccacagggaacatcaagaatatatgatggattctctctt
ctgtatgtgcaaggaaatgagagagcacatggccaggatttgggtactgctgggagctgt
cttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtctgtaacttt
gcatcaaggaatgactattcctactggctgtcaacccccgagtcgatgccgatgagcatg
gagcccctgactgggccaagcattcagcccttcattagccgatgtgttgtgtgtgaagct
cctgctatggtgatagctgtccacagccagaccattcagatcccttcgtgtcctccaggc
tgggactccctctggattggttactctttcatgatgcacacgagtgctggagcagagggc
tctggacaggccttggcatcgcctggctcctgcttggaagagttccgctcagcgccgttc
atcgaatgccatggccggggcacctgtaattactatgccaattcctacagcttctggctg
gcaactgtagaggtgtcagaaatgttcagcaaacctcagtctgagacactgaaagctgga
gacttgaggacacggattagtcgttgtcaagtttgcatgaagaagacgtaa
DBGET
integrated database retrieval system
