Serinus canaria (common canary): 103816527 Help Entry 103816527         CDS       T05755                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism scan  Serinus canaria (common canary) Pathway scan03013   Nucleocytoplasmic transport scan03040   Spliceosome Brite KEGG Orthology (KO) [BR:scan00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103816527 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     103816527 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:scan03019]     103816527 (THOC2)    03041 Spliceosome [BR:scan03041]     103816527 (THOC2) Messenger RNA biogenesis [BR:scan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      103816527 (THOC2) Spliceosome [BR:scan03041]  Complex C   Other components    EJC/TREX     103816527 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     103816527 (THOC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  103816527 NCBI-ProteinID:  XP_030084860 LinkDB All DBs Position Unknown AA seq 1826 aa AA seqDB search MTIQILAEHLAPTPYSGLAAPNAHDSAPRHRNAHAHKRPTVLTQTPHAERPAPRFWRAHR SSNVDARYNTARRXTHARTRYRPDSTXATRATARAARTPPTRXHTRAQHAAPARXAAPRX RXARRAAFARPRPRDRARXXDPGSARAREXARCAAXGXDXEKAAERVXRAGAPXEXGAAA XGGARRPGLARPRRLGGGGEDVGRGSVLAVGRRVEAVVGMRAWAALPSGSAGCCRPPPTH GRRSWAQLSGSPERPLPASGPDMSGVGLDFSRPSCVQLCRALSENKNHDVGFRDIQQALY ELAYHVVRGNLKHDQASNVLDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLKERLDPET LESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDL ILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFK FKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVR KLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSIMDQMPPF YSTSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESFEELRKEV FNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLLSITDQVL LPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKY IMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDV LAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAG KSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKD ALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTE DYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYIT SCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMK AIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKN ETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASC TENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYE NFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKI CQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNGPGGAGMP TSVTINTVRLEEGTTEETDKLKEKSQGVVKVINKTVNATPKVTTSNGNSASNSKIIKEKD DKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKEEKAREIKEKTPKSDKEK EKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENAKGGEKVPV AGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKESSAKHYINHTTPTL SKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTT GSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEK TEKKEKRDSTGGKEEKKHHKSSDKHR NT seq 5481 nt NT seq  +upstreamnt  +downstreamnt atgaccatccaaatcttagcagaacacctcgcccctacaccgtactcaggcctggcggcg cccaacgcgcacgactcagcaccccgccaccgcaacgcacacgcgcacaagcgccccact gtactaacgcagacgccacacgcggagcgccccgccccacgcttctggcgcgcacaccgc agttccaacgtggacgcgcgttacaacacggcacgccgcncgacgcacgcgcgcacgcgc taccgcccggactcgacgngcgcgacgcgcgcgacggcacgcgccgcccgcacgccgccc acncgtcancacacgcgcgcncagcacgccgcgcccgcgcgcngcgcagcgccgcgcncc cgcncggcgcggcgcgccgcgttcgcgcggccgcgccctcgngaccgcgcgcgcngcncc gatccgggctcggcgcgngcacgggaganggcgcgctgcgccgcgagngganaagacngg gagaaggcggcagagcgagtgngacgngcgggcgcgccgngggagganggcgcngcggcg ngcggaggggcgaggcggccgggcctcgcccgcccgcggaggctggggggcggcggagag gacgtcggtcggggctccgtccttgctgttgggcgtagggtcgaagccgtcgtcgggatg agagcctgggccgccctcccgtccggttcggccgggtgctgccgccctccgccgacgcac ggccgccgtagctgggcccagctttccgggagccccgagcgcccccttccagcctcgggg ccagatatgtcgggggtcgggctcgacttcagccgcccctcgtgtgtgcagctgtgtcgt gctctcagtgaaaacaaaaatcatgatgtgggtttcagagatattcagcaggctttgtat gagcttgcttaccacgttgtcagaggaaacttaaagcatgatcaagcttctaatgttctt gatattgaaacaagttgtttagaagaaaaaaataagagggatcattttacacaactggta ttggcctgtttgtatcttgtatctgacactgtcctaaaggagcgtttagatccagagacg ctggagtcattgggactcatcaagcagtctcaacagttcaatcaaaaatctgttaaaata aagacaaaactattttataagcaacagaaatttaatttgctaagagaggagaatgaaggt tatgcaaagcttattgcagaattgggtcaagacttatctggaaatatcactagtgattta atccttgaaaatatcaaatctttaataggatgtttcaatcttgatcctaacagagttttg gatatcatcctagaagtctatgagtgcaggcctgagtatgatgatttctttgtaccactg atagagtcttacatgtacatgtgtgaacctcaaactctatgccatatccttgggttcaaa ttcaaattttatcaggatccaagtggtgagaccccttcctccttatacagagttgctgct gtccttttgcaacataatctcatagatttggaagatctttatgttcatcttctaccaggg gataatgccatcattgaggagcacaagcgagagatagtggaagctaaacaaattgtcaga aaacttaccatggtcgtcttatcatctgaaaagactgaggaaaaggagaaagaaaaggaa aaagaggaggagaaaactgaaaagcctcctgataatcaaaaacttggcttattggaagcc ttattgaaaattggtgattggcaccatgcacaaagtatcatggatcagatgcctcccttt tactctacttcgcacaagccgattgcgatcgcgctttgccagctcgtccacgtgaccatt gagcccctgtaccgcagagttggtgtacctaaaggagctaaagggtcaccaatttcctct ttgccaaacaagagagcaccaaaacaagcagagagctttgaggaattgagaaaggaagtg ttcaacatgctttgttaccttggtcctcatctgtcccatgatcccattttatttgcaaaa gtagtgcgccttggaaaagcatttatgaaagagtttcagtctgatggaagcaaacaggaa gataaagagaaaatggaaacactgttcagctgtttgttgagtattactgatcaagtcttg cttccatctctttccttgatggactgcaatgcatgcatgtctgaggaattatggggaatg ttcaaaacctttccataccagtaccggtaccgtctctatgggcaatggaagaatgaaaca tacaatagtcacccactgcttgtgaaagttaaagctcaaaccatagatcgagccaaatat ataatgaagcgtttaactaaggaaaatgtgaaaccctctggaagacaaattgggaagctc agccacagcaatcctacaattttatttgattatattttatcacaaatacaaaaatatgat aacttgataactccggttgttgattcgctgaaatacctcacttccctgaactatgatgtc ttggcatattgtatcattgaagcattggcaaaccctgagaaggagagaatgaagcatgat gacactacaatctcaagctggctgcagagtctggcaagcttttgtggtgccgtttttcga aaatacccaattgaactcgcaggcctcctgcagtatgtagccaaccagctgaaagctggc aaaagctttgatttgcttattttaaaagaggtagtgcagaaaatggcagggatagaaatt actgaagaaatgaccatggagcagttggaagccatgactggtggagaacaactgaaagct gagggtggatactttggccaaatcaggaatacaaagaaatcatctcagagattaaaagat gcgttattggaccatgatcttgccctcccactgtgcctgcttatggctcaacagagaaat ggtgtcgtctttcaagaaggaggggaaaagcatttgaagctagtgggaaagctgtatgat cagtgccatgatacccttgtacaatttggtgggtttttagcatccaatctaagcacagag gattacattaagcgagtgccttctattgatgttctctgtaatgagtttcacacacctcat gatgctgcatttttcctctcaagacccatgtatgcacaccacatttcatcaaagtatgat gaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcacaaatacattaca tcatgtgagttggtgatggctcctgttcacgaagctgtgatttctctgcacctccctaaa gtctgggatgacatcagccctcagttttatgctacattctggtctttaacaatgtatgac cttgctgtgccacacagcagctatgacagagaagtcaataaacttaaagtccagatgaaa gccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaacgttgc acagctctgcaggacaaactccttgaagaggagaagaagcagttggagcatgtgcagagg gttctacagagactgaaactagagaaagataactggcttctggcaaaatctaccaaaaat gagaccatcaccaaatttttacagttgtgtatatttcctcgctgcattttttcggcaatt gatgcagtttactgtgctcactttgttgaactggtgcatcagcagaaaacacccaatttc tccacacttctctgctatgaccgagttttctctgatattatatatacagttgcaagttgc acagaaaatgaagccagtagatatggcaggtttttatgctgtatgctggagactgtgacc aggtggcacagtgacagagtcatatatgaaaaggaatgtggcaactatccaggcttccta actatattacgagcaactggatttgatggtggaaataaggctgatcaattggattatgag aattttagacacgtggtacacaaatggcactataaattaactaaggcttctgtgcactgt ctggaaacaggtgaatatacacatatcagaaacatcctgattgtgctgaccaaaatcctt ccatggtatccaaaagtgctgaatctgggtcaagccttggaaagaagagtacacaagata tgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctattctgga cagttgaaaagtaggaagcctttcatgatacctgaaaatgaatttcaccacaaagaccca cctgccaggaatgctgtacctgcaacagtacaaaatgggccaggtggtgctgggatgcct acgtctgtcacaataaatacagttagactggaagagggcactactgaggagactgataaa ctaaaggagaagtctcagggtgtggtgaaagttattaataaaactgtcaacgctacaccg aaggtgacaacaagcaatggaaacagtgcatctaatagcaaaattattaaagagaaagat gataaagaaaaaagcgggaaggaaaaagataaagaaaaaaaagacaagactccagctgcc actccagagatgaaggcacttgggaaagatgggaaagataaaccgaaggaagaacgggca aacaaagaggagaaagcaagagagatcaaggagaaaacgccaaaatctgacaaagagaag gaaaaggtgaagaaagaagaaaaagcttcaaaagaagaaaagtccaagacggttgttacc atcattgagtcaaagtcaactgcagaaaaggagagagaaaaggagccgtccagagaaaga gatctagcaaaggaaatgaaatccaaggaaaatgctaaaggaggagaaaaggtgccagta gctgggtccttgaagtcacctgttccccgatcagaaacatcagaatctgaaagggaacaa aaacgccgcaaagttgatacacattcttctccgtcacattcctcaacagtaaaggacaac ctcaacgaactcaaggaatcttcagcaaagcactacataaaccacactactccaacactg tccaagagtaaggagagagaagtggagaagaaagatttggacaagtcaagggaaagatcc agagagagagagaagaaagatgaaaaggacaggaaggatcgaaaaagggatcattcaaac agtgaccgagaggtaccacaggattcaaccaaacgacgcaaagaggaaaatggcacaact ggttcttcaaaacatagcaaaagtgaaagtccttctgattcccctcgcttaaatgaaaaa gagaaggagaaaaacaaatcaaaatcttcaggaaaagagaagggtgattcaatcaaggca gaaaagatggagaagagctcctctggtagcaaaaaggaatcaagacatgataaagaaaaa acagagaagaaagaaaagcgggacagtactggggggaaagaagaaaagaaacatcataaa tcttcagacaagcatagataa

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