Serinus canaria (common canary): 103816548
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Entry
103816548 CDS
T05755
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
scan00535
]
103816548
Proteoglycans [BR:
scan00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
103816548
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_NXF1-5
Toxin_11
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
103816548
NCBI-ProteinID:
XP_030084558
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MFSLVIFIFTCAAKAGLGMNGSNSCPSMCKCTPEETILCNRAGLKTLPGEIAPSTISLNL
SNNYLRNLNTNTFRNLTFLHSLWLDGNNLTFLTPGTFHALSRLQELHLSRNSRLTHLHAN
TFRGLLNLTSLDLSHCNIFEIHPLLFSHLPSLERLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLETLNDLNLRKNRIWIIQNGAFSKLLRLDMLNLGHNFITDLPNQL
FEGLIQLKTMHLEANRITAVDCAFRQLLNLRNLYLNNNQISSISDSAFLYLNKLHFLHLS
KNNLSLLPVRLFSSLPRLRYVLLSHNPWSCDCSALWLRRWTAALIQGLGCSFPGPANSTA
XXQPLPGLLGDCPVPLELPTEDRCRGAGTSVAPRPPALPGLLILLALACHTWYSERGWGT
LLATF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttctctctcgttatatttatatttacttgtgcagcaaaggctgggctgggtatgaat
ggctccaattcatgcccaagcatgtgcaaatgtacacccgaagagaccattctctgcaac
agagctggactgaaaaccctgcctggagaaatagcaccctccaccatctctctaaacctc
tccaacaattatttgcggaatctcaacaccaacaccttcagaaacctgactttccttcac
agcctctggctagatgggaacaacctgactttcctgaccccaggaactttccatgctctc
agcagactgcaagagctgcacctcagcaggaactcacgcctcacccacctgcatgcaaac
actttcagaggactattgaacctcaccagcctggatttgtcccactgcaacatcttcgaa
atccacccacttctattttcacacttgccttctttagaaaggcttgatttagcctccaat
aacatgaggtatgtcccacaagcctttaggaacctctccagcctcacgaggctgtccctg
gagggcaaccacatagaggccatcggcagagattccctgaaggacctggaaaccctgaac
gatctcaatctcaggaagaatcggatatggatcatccaaaacggagctttctcaaagctt
ctcagactggacatgttaaatttaggccacaacttcatcactgatttgcctaatcagctt
tttgaaggattgatccagctcaagaccatgcaccttgaagccaacagaatcactgccgtc
gactgcgccttcaggcagctgctcaacttgagaaacttgtacttgaacaacaaccagatc
tcctccatctcagactcggcttttttgtacctaaacaagctgcacttcctccacctgagc
aaaaacaacctcagcttgctgcccgtgcgcctgttctcctcgctgcccaggctgaggtac
gtgctcctgtcccacaacccctggagctgcgactgcagcgcgctctggctccggcgctgg
acggccgcgctcatccaggggctgggctgctccttcccgggccctgccaacagcacagcn
nnnnnncagcccctgcccgggctcctgggggactgccccgtgcccctggagctgcccact
gaggacaggtgcaggggggctggcaccagcgtggcgcccaggccccccgccctgcccggc
ctgctcatcctgctggcactcgcctgccacacctggtacagtgagaggggatggggcacc
ctgctggccaccttttaa
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