Serinus canaria (common canary): 103816606
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Entry
103816606 CDS
T05755
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
scan
Serinus canaria (common canary)
Pathway
scan04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103816606 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103816606 (VPS35)
Membrane trafficking [BR:
scan04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103816606 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
103816606
NCBI-ProteinID:
XP_030083365
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKDNSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggacgaagccatt
caggctgtgaaggtgcagtcgttccagatgaagagatgcttggacaagaacaagctcatg
gatgctctgaaacatgcttccaacatgcttggggagctgcggacttcaatgttatctcca
aagagctattatgagctctacatggctatttctgatgagctacactacttggaagtctac
ctgacagatgaatttgctaaaggcaggaaagtggcagacctttatgagctagtacaatat
gctggaaatatcattccaagactgtatctgctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaggatattttgaaagacctggtggagatgtgccgtggagtg
cagcatcctcttagaggcctcttccttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgactcaatg
gattttgtgctgctgaactttgctgagatgaacaagctgtgggtgcgaatgcagcaccag
ggccacagtcgggacagagagaaaagggagcgagagaggcaggagctgaggatcctcgtg
ggaacaaacctggtccgcctcagtcagctggaaggggtcaatgtggagagatacaagcag
attgttctgcctggaatactggagcaagttgtgaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgatatcttttcacagcaggttgccactgttatacagtctcggcag
gatatgccctcagaggatgtggtgtctttgcaagtttctctcattaacctggctatgaaa
tgctacccagaccgtgtggactatgttgacaaggtgttggagactactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgactaga
cttttgaaaatcccagttgatacttacaacaatatcctgacagttctgaaactaaaacat
tttcacccactctttgaatactttgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtattggattataacacagaaattgtgtcccaagaacaggttgatgctatc
atgaatttggtatcgacgctgatccaggatcaaccagatcagcctgctgaagatcctgac
cctgaggactttgcagatgagcagagtcttgtggggagatttattcacctgctgcgttct
gatgaccctgaccagcagtacctgatcctcaacactgcccggaagcactttggggcaggg
gggaaccagcgcatccgtttcacgctgccgcccttggtgttcgctgcctaccagctcgct
tttcgctacaaagacaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcatttgctcatcagaccatcagtgctctgatcaaagcagagctggcagagctgcct
cttcgactcttcctgcagggagcactggctgcaggagagattggctttgagaatcatgaa
actgtggcctatgagttcatgtcccaggccttctctctatatgaagatgaaatcagtgac
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaggagaaccacgagcctttgaggactcagtgtgcactggcagcctccaaactc
ctgaagaagccagaccagtgccgagctgtgagcacttgtgcccatctgttctggtctggc
cgaaacactgacaagaatggagaggagcttcatggaggaaagagagtgatggaatgccta
aagaaggctctgaagatagcaaatcagtgcatggacccttctttgcaagtccagcttttc
atagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggagtcaccagaatctgaggggccaatttatgaaggtcttgttctttag
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