Serinus canaria (common canary): 103816688
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Entry
103816688 CDS
T05755
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103816688 (CTCF)
03036 Chromosome and associated proteins [BR:
scan03036
]
103816688 (CTCF)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103816688 (CTCF)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103816688 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
103816688
NCBI-ProteinID:
XP_009088947
UniProt:
A0A8C9MR43
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MKNSQHEENKSVQAEVQKRQEINQEGEMEGEAVNAIVEESETFIKGKERKTYQRRREGGQ
EDDACHIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVPQEAEATVDDT
QIITLQVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPM
ICHTLPLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLR
YTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSY
TCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVT
SGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYK
LKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG
VHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMH
KRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH
ADNCSGLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEI
EAEPEVEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKE
PDAETAEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagccagcatgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaa
gaaataaatcaggaaggtgaaatggaaggtgaggcagtcaacgctattgtggaggaatca
gaaactttcattaagggaaaagagaggaaaacctatcaaagacgccgcgaaggtgggcaa
gaggatgatgcttgtcatataccgccaaaccaagcagatggaagtgaagtggtgcaggac
gtcagcagtggggtgcagatggtgatgatggatcagctggatccgactcttcttcaaatg
aagaccgaagtaatggaaggtgcagtgcctcaagaagctgaggctactgtggatgacaca
cagatcataacacttcaggttgttaacatggaagagcagcctataaacctcggtgagctt
cagctggtccaagtacctgtaccagtgactgtacctgttgccaccacatctgtggaagaa
ctgcagggagcttatgaaaatgaggtttccaaaggaggcctgcaggagggggagcccatg
atctgtcacactctccctttaccagaaggcttccaagttgtgaaagtgggtgcaaacggt
gaggtggagacactggaacaaggtgaacttcagccacaggaagatcccaattggcaaaaa
gatccagactatcagccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgc
tacactgaggaaggcaaagacgtggatgtctctgtatatgactttgaagaggagcagcag
gagggtttgttgtccgaggttaatgcagaaaaggtggtgggcaatatgaagccaccaaaa
ccaacaaaaattaaaaagaaaggtgtaaagaagacattccagtgtgagctgtgcagttac
acttgtccgcgtcgttccaacctggaccgccacatgaaaagccacaccgatgaaagacca
cacaagtgccatctctgtggcagggctttccggacagtcacattgctgaggaaccacctc
aacactcacacaggtactcgccctcacaagtgcccagactgcgacatggcctttgtgacc
agtggagagttggttcggcatcgccgctacaaacacacccacgagaaaccattcaaatgt
tccatgtgtgactatgccagtgtggaggttagcaaattgaaacgccacatccgctcgcac
actggggagcgcccgttccagtgcagcctgtgcagctatgccagcagagacacctacaaa
ctgaagaggcacatgaggacccactccggagagaagccatatgaatgttacatctgccat
gctcgtttcactcagagcggtaccatgaagatgcacattttgcagaagcacacggagaat
gtggccaaattccactgtcctcactgtgatactgttatagcgagaaagagtgacctgggt
gtccacttgcggaagcagcattcctacattgagcagggcaagaagtgtcgctactgtgac
gctgtgttccatgagaggtatgccctcatccagcatcaaaagtcccacaagaacgagaag
cgcttcaagtgtgaccagtgtgattatgcctgcagacaggagcggcacatggtcatgcac
aaacggacccatactggagaaaagccttatgcctgtagccattgtgataaaaccttccgc
cagaagcagctgctcgacatgcacttcaagagataccacgatcccaactttgtccctgct
gcctttgtctgctccaagtgtggcaaaacattcactcgcaggaacacgatggccagacat
gctgataactgctctggcctagatggtggggaaggagagaatggaggagagacaaagaaa
ggcaaacgtggccgaaagagaaagatgcgttctaagaaagaagattcttctgatagtgag
gaaaatgctgaaccagatttggatgataatgaagatgaggaggagacagcagtagaaatt
gaggctgaaccagaagttgagcaagaggctcctgcaccacctcccagtaagaaaagaaga
ggaagaccaccaggcaaagctgctgcacaaccaaaacaatcccagcctgcagcaatcatt
caggttgaagaccagaacactggtgaaattgaaaacattatagttgaagtgaagaaagaa
cctgatgcagaaacagcagaggaagaggaggaagctcagcctgctgtagtggaagctccc
aatggagacctcacccctgagatgattctcagcatgatggaccggtga
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integrated database retrieval system
