Serinus canaria (common canary): 103816865
Help
Entry
103816865 CDS
T05755
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103816865 (PKD1L2)
04091 Lectins [BR:
scan04091
]
103816865 (PKD1L2)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103816865 (PKD1L2)
Lectins [BR:
scan04091
]
C-Type lectins
Others
103816865 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
SUEL_Lectin
Lectin_C
REJ
GPS
PKD
EphA2_TM
UL45
AGA2
Motif
Other DBs
NCBI-GeneID:
103816865
NCBI-ProteinID:
XP_030083568
LinkDB
All DBs
Position
Unknown
AA seq
2476 aa
AA seq
DB search
MWLGVTVLIFLAVCLAVEEATDEGIPCSKYQQAFNHSCYEFVRLQQTFSGAQSWCERGGG
HLVFIQNEETQEFLQKHIAEDQEWWIGLISNSLLNETTDGSITWLDTSNIIYSNWYKDQP
FPFSSMCGYILKNAKYQWGVTENCSQEFDFICEFESGQSIACDNSNATVQCGSGEVIQIE
ESFYGRKTPHYCVSETPLQLERDEGCSWLSVKDEVAGQCQGLQACQVAADGTFFGDPCPA
LGSYLSIQYHCKEGLQLVMKDTCFVFENITVTLIWLLSPYSGNLSCTISTGDGHTIDPYY
PLTLVSNLTYRYSSPGEFTVFVECTTSEWHVMAQRQVTVQDQEDQLSITGCYSQYEAGNS
SCCRTLYGELLWIQVQLTGGNGVTYSVLADNMTLSESSAKEGFVPHNLTLSRASQELIGP
GVHQLEIRASRSTMASQISGTIAVHLIEPVSGIQAAVASHTLQLGEDLEVNVSVSHGAPE
KLMFEVIGSNQSQCHKADGPRGELRAYGVPVPWEGTFVVKVVAMNDFSNMSLDLGFITVL
ANSSHKKDSDKEEGRYKTNTQKKNEHKIYIKPSRHVDPFTAVTLGWPDNNNNSSFLWTCG
ACWPAWNECVKQQIILINRSEVQIPPSCLPPPKSAVTVRITVQNHGSEERQDEQCLYVTA
KQELQLEIRCEANCKPVNVSDEVVLSVSGQEDSQAIYYNWYLDNTFQNKPTTLPLACGLT
GFQQSSLNLLQSNSSMLRMSSSFLQTQGEAFQIKVTGTTQRGYGERWFLLSTVPPPEAPG
CALSPEHGSVLTAFRVSCSAPGSLGPGPAGPGRQLTYCFYVTPDSLLDCSPDPELFPVYL
PLGEEKNNFILHVKIIVSNNFGDTVQTNASVKVGPADMMDGNLTLQAVVSEKANTILKDG
NSSMSLLQLYKSVTSVLNQQIQEESFNMSLQTNTRKELRELMLTTLSVVNITSMQTALKM
SKVLKEITYRSEELSVSAQVEASNTLKHVSASLLAVNTEHSRDAQELKEAANYLLNAVSS
VLKASVEIRAGNTSVPEAKQSSVSHQLLSTVENLQSALLFGKAPGDEPTVLTSPSATMYM
HRLQTENMDSTSINISNSSSASFTLPPASSLNISGVDGETVDIRMVSFAMNPFFSSDSSF
DISGTVGGLSLTGLDGLIIPVSNLKENIEIMLPRLSATQEDKILLNLGNYSTFQVNVTSE
NTSIVIHLESEHDIPLILYLGYGYHPNETNYDMKNHLFYKKTSGGEMNSWVLSPEELIFG
EGIYYFMVLQDMGMDSTVYHGLTINATCFASRCVFWDEHQGGWNSYGCHVGPKTNPSRTQ
CLCNHLTFFGSSFFVIPNAIDVSKTAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKD
IQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGESEPHHLNDP
DTPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLC
NSWLAIDIGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTR
AQRVSCCFSLLLCTMLTSIMFWGVPKEPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINL
LIVQIFRNIRPRPAQQGREKKPGKNGRVSPSLPSTPGATQAASLTPEAVTKDIRRIANSL
FKALKTPSLTSAPDLEKSANINTLLSLVEDVICQQNRAGQELYDESKDGPIIVTLGAMDI
QEKTRSPTPEKRICDQLKYNDYHRCLYLQLQHVEMELELLGPHKFQMPQSYTQAVCQVQH
MKNLLENQICSSASISEGWSHTPNLSSDDKKSPSPRGLPWWFVFIAWFLVAATSSVSGFF
TMLYGLHYGKENSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAI
DGPLSAPGDSHPLFGVRRDSRSNIYRPPPAADVEKMKISYVKEQKAFALIREILAYLGFL
WMLLLVAYGQRDPNSYYLNKHIEDSFTDGFHDVYSYQDFFTWANTTLLKNLYGTYKGFIT
DGNSKLVGSARIRQVRVKGDTCPISPRLQHIVEECHAPYSLQTEDTSVYGEHWNTSALDN
SSDMSSAWQYQSQSKLRGHPSWGKLAIYSGGGYVIHLGTDPKNASRILQYLFNNVWLDTF
TRAVFIEFTVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTDSLHIFVLAAEV
IYFLFIVYYMIVQGKLLKSLRWRYFHSKWNLLEMAIILISWSALSVFVKRTVLGTRDISY
YQEHKEDSISFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDI
SGFIIVIAIMFLAYSIAANLIFGWKLYSYKTLLDSAETMVSLQLGIFNYEEVLDYNPILG
SFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLIKLFSFFGIKCKK
EEKPVTGEQLEQPFSE
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgggagtcacagttctgatttttcttgctgtgtgtttggctgtggaggaagca
actgatgaaggaataccttgctcaaagtaccagcaagctttcaaccattcatgctatgaa
tttgttagactccagcaaaccttctcaggtgcccagagctggtgtgagagaggaggaggg
catcttgtctttattcaaaatgaggaaactcaagagttcttgcaaaaacatattgctgag
gatcaggaatggtggataggactgatctcaaactccttgctgaatgaaactactgatggg
tcaataacctggctggacacttcaaatataatctacagtaactggtacaaggatcagcca
tttcccttctcatccatgtgtgggtacatcctgaagaatgccaagtatcagtggggtgtg
actgaaaattgcagccaggaatttgacttcatttgtgagtttgaatctggccagagcatc
gcttgtgataattccaatgccactgtacaatgtggatcaggagaagtgattcaaattgaa
gagagcttctatgggaggaagacccctcattactgtgtgtcagagactcctctgcagctt
gaaagagatgaaggctgcagctggctcagtgtcaaggatgaagtagcaggccagtgtcag
gggctgcaggcctgccaggtggcagcagatggcactttctttggagatccttgtccagct
ttgggaagctatttgtctattcaataccactgcaaggaaggtctgcagctggttatgaaa
gacacatgttttgtctttgaaaatatcacggtcactttgatctggctgctctcaccatac
tctgggaacctttcctgtaccattagcactggagatggtcacaccatagatccttactac
cctctaacactggtcagcaacctcacatacaggtactcctctcctggggagtttactgtt
tttgtggagtgcaccaccagcgagtggcacgtgatggcccagaggcaggtgacagttcaa
gaccaggaggatcagctcagcattaccgggtgctacagccagtatgaggcagggaacagc
tcctgctgccggacactctacggggagctgctgtggatccaagttcagctcactggaggc
aatggagtaacctacagtgtgttagcagataacatgacactgagtgaatccagtgcaaag
gaaggttttgtcccccataacctgacactcagcagggcctctcaagagctgataggccca
ggggtgcaccagctggaaatccgagcatccaggagcacgatggcatcgcagatctctggg
actatagctgttcatttaattgagccagtatctggaattcaggctgcagtagcttcccac
actctgcagctgggggaggatttggaggtgaatgtctctgtgtcccacggtgccccagag
aagctgatgtttgaggtgattggatccaaccaaagccagtgccacaaagcagacggccct
cgtggggagctgcgggcgtacggcgttcccgtgccctgggaaggtacttttgtagtgaaa
gtggtggccatgaatgacttctcaaacatgagtctggatcttggattcatcactgtgttg
gcaaatagctcccataaaaaagattctgataaggaagaaggcagatacaaaacaaatacc
caaaagaaaaatgaacacaaaatatatattaaaccgagtcgccatgtggatcctttcaca
gctgttacacttggctggccagacaacaacaataattccagttttctctggacctgtgga
gcttgctggcctgcatggaatgaatgtgtgaagcaacagataatcctaatcaaccgaagt
gaggtgcaaatcccaccttcctgccttcctcctccaaaatcagcagtgactgtcaggatt
actgtccaaaaccatggcagtgaagagaggcaggatgagcaatgtctctatgtgactgca
aaacaagaactgcaactggaaatcaggtgtgaggcaaactgcaagccagtgaatgttagt
gatgaagttgttttgagtgtctctggacaggaggactcccaggccatatattacaactgg
tatttagataacacgttccaaaacaagcctacaaccctccctctagcctgtggcctgact
ggtttccagcagagctctttgaatttgcttcaaagcaactcatccatgttgagaatgagc
agctccttcttgcagacacaaggagaagcttttcagattaaagtaacaggcacgactcag
cgaggctacggggagcgatggttcctgctgagcaccgtgcccccgcccgaagcccccggc
tgtgccctgagtcccgagcacggctcggtgctcaccgccttcagagtctcctgcagcgct
cccggctcgctagggccgggcccggccggtcctggcaggcagctcacgtattgcttctat
gtgacaccagattctctcctggattgtagcccggatcctgaactcttcccagtttatctt
ccacttggagaagagaaaaataattttattttacatgtgaaaattattgttagcaacaac
tttggtgatacagttcaaacaaatgcttcagtgaaggttggacctgcagatatgatggat
gggaacctgaccctgcaggctgtggtatctgagaaggcaaacaccatcctaaaagatggg
aacagcagcatgagtctcctccagctgtacaagtcagtgacatctgtccttaaccagcag
atccaagaggaaagttttaacatgtctttacagacaaacacacgaaaagagctccgagag
ctgatgctgacaactctctctgttgttaacataacatcaatgcagactgctctgaagatg
tcaaaggtattgaaagaaatcacttacaggagtgaagagctgtctgtctcagcacaggtg
gaagccagcaacactctgaaacatgtcagtgcctccttgctcgctgtaaacacagagcac
agcagagatgctcaggagttaaaggaggcagccaactatctgcttaatgctgtgagcagt
gttcttaaagcttctgtagaaatcagagctgggaacacttcagtgccagaggcaaagcag
agttcagtgtcacaccagctgctgagtacagttgaaaatctccagagtgcccttctgttt
gggaaggcaccgggtgatgagccaacagtcctcacctctccctctgccacaatgtatatg
cacagattacaaacagaaaacatggatagcacatccattaacatctccaattccagctct
gccagctttactctcccacctgcttcctctctcaatatttcaggagttgatggtgaaaca
gtggatataaggatggtgagctttgctatgaatcccttcttctccagtgacagcagcttt
gacatcagtggaacagtgggaggtctaagtctaactggtctggatggtttgatcatacca
gtcagcaacctcaaagagaacattgagatcatgttaccaaggctttcagcaactcaagaa
gataagattctgttgaatctgggcaattatagcacttttcaagtaaatgttacctcagaa
aacacatctatagtgatccacctggaatctgaacacgacattccactaatactttacttg
gggtacggttatcacccaaatgaaaccaactatgatatgaaaaatcatctgttctataag
aaaacttctggaggtgagatgaacagctgggttctcagcccagaagaactcatttttgga
gagggaatctactatttcatggttttacaagatatgggaatggattcaacagtttaccat
gggctaaccataaatgccacttgctttgcatcccgctgtgtattttgggacgagcaccag
ggaggctggaacagctatggatgtcatgtaggaccaaaaacaaatcctagcagaacacag
tgtctgtgcaaccatctgactttctttgggagctccttctttgtcatacccaatgccata
gatgtcagcaaaacagcacagctgtttggtacattcgtggacaatcctgtggtggtgaca
actgtaggatgcatctttctgatatatgtgcttgtagttatttgggctcgaaggaaagac
atccaggatgatgccaaagtgaaaatcacagtcctggaagacaatgacccctttgctcag
taccgttaccttgtgacagttttcacaggacaccgccgtggtgcagccacaacctccaag
gtaactctcaccctctatggactggatggagagagtgagccccaccatctaaatgatcct
gatacaccagtctttgaacgtggaggagtggatgttttcctcctctgtaccttctttcct
cttggggaactgcagagtattagattgtggcatgataattcaggggacagtccatcctgg
tatgtgaatcgagtattagtccatgacctggcttgggatcagaaatggtatttcctctgc
aactcttggctagccattgatattggagaatgtgtcctagacaaagtgttcccagtagca
acagaacaggacatgaagcagttcagcaatctgtttttcatgaagacctccaagggtttc
caggatgggcacatctggtactcggtgttcagccgctccccacgaagctccttcacgcga
gcccagcgcgtgtcctgctgcttctcactgctcctctgcaccatgctgaccagcatcatg
ttctggggtgtgccaaaggaacctgctgagcagaaaatggatttgggtaagattgaattc
acatggcaggaagtgatgattggctttgagagttccctcctcatgttccccatcaacctg
ctcattgtgcagatcttcaggaacatacgaccccggccagcccagcaaggcagagagaag
aagccgggaaagaatggccgagtgtccccaagcctgccttccactccaggggccacccag
gctgcctctctcactccggaggctgtgacaaaggacataagaagaattgccaactcactc
tttaaagccctgaagactccatctctcacctcagcaccagaccttgaaaaatcagctaat
atcaacacactcctgtcactggttgaggatgtaatctgtcagcagaacagagctgggcaa
gagctttatgatgagagcaaggatggccctataattgtcacattgggtgctatggatatc
caagaaaaaacaagaagtccaactccagagaagagaatttgtgaccagctgaaatacaat
gattaccatcgctgcttgtacctgcaactccagcacgtagagatggagctggaattactg
gggccccataaatttcagatgcctcagagttacacacaagctgtttgtcaggttcagcat
atgaagaacctcctggagaaccaaatctgctcatcagcatccatcagcgaggggtggtcc
catactccgaatttgtccagtgatgacaagaaaagtccttctcccagagggttgccctgg
tggtttgtgttcattgcttggttccttgtggcagccaccagcagtgtgtccgggttcttc
accatgctctatggactccattacggcaaggagaactccatcaagtggctcatctccatg
gtcatctccttcttggaaagtcttttcatcacacagcccttaaaggtgctgggatttgct
gctttttttgctctggttctgaagaaggtggaacatgaggatgaagaaaacactgctatt
gatggacctttatctgcaccaggtgattcacacccactcttcggggtccgaagggacagt
aggagcaacatttaccggccacctcctgctgctgatgtggagaaaatgaaaatcagctac
gtgaaggagcagaaagcatttgccctcatcagagaaatcctggcctatctggggttttta
tggatgctgttactggttgcctatgggcagagagatcccaattcctactatttaaacaaa
cacattgaggacagctttacagatggattccatgatgtctacagttaccaggattttttc
acgtgggcgaacactactttactcaaaaatctttatggaacatataaaggattcattaca
gatggcaattccaaactggtgggtagtgctcgaattcgccaagtaagagtgaaaggagac
acctgccctatttctcccagactccagcacatagttgaggaatgccatgctccatactcc
ctacaaacagaagatacatcagtttatggggagcactggaatacctcagcccttgataac
tcctctgacatgagctcagcatggcagtatcagagtcagtccaaactgagaggacacccc
agctggggtaaacttgccatctacagtggagggggatatgtgattcacctgggaactgac
cctaaaaatgcctccagaattctccagtaccttttcaacaatgtctggcttgacaccttc
acaagagcagtgtttattgaatttacagtctacaatgccaacgtgaacctgttctgcatt
ataagcctgatgtttgaaagcaatgctttaggggccttcttcacaagtgcagagctgcaa
agtgtccggctgtacccctacaccgacagcctccacatctttgtgcttgcagcagaagtc
atttatttcctctttattgtgtactacatgatagtacagggaaagctgctgaagagtctg
agatggagatacttccacagcaagtggaatctcctggagatggccattatattgattagc
tggagtgctctgtcagtgtttgtgaaacgaacggtccttgggaccagggacatcagctac
taccaggaacacaaggaggactccataagcttcagtgaaacagcgagagctgatgcagtt
cttggttacctgattgcattcctggtgcttctctccacagtgaaactgtggcatctgctg
aggctcaaccctaaactgaacatgatcacttcaacactaaggagggcatggggtgatatc
tctgggttcatcattgttattgcaatcatgttccttgcctattccattgctgcaaacctg
atatttggctggaagctctactcttacaaaaccctccttgattcggcagagaccatggtc
agtcttcagctgggaatcttcaactacgaggaggtcttagactacaatccaattttaggc
tccttcttaattggatcctgcatcatttttatgacatttgtggtactgaatctgttcatt
tcggtgattctggttgcttttagtgaggagcagaagcattaccaggcttcagaagaagag
gagattgttgatctaatgctaataaaactcttcagtttctttgggataaaatgcaagaag
gaagagaagccggtcactggcgaacaactggaacaacctttcagcgagtga
DBGET
integrated database retrieval system
