Serinus canaria (common canary): 103817034
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Entry
103817034 CDS
T05755
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
scan
Serinus canaria (common canary)
Pathway
scan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103817034 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scan03400
]
103817034 (XPC)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103817034 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
103817034
NCBI-ProteinID:
XP_009089357
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MARKRRASPRPAAAKKRRSGRLPKEEEEEEEEKDDFEEKKPSIKKTSKPPARKKEEDCET
EVSNSAKTSKPSKQEEANSQIKESKKNARNKENCIKEEICSDSLKHPQKEMKLKTESPVK
KEMDEDNTDNDDDDDESEDEWEDVEELQEPSTDKLEEAAVLPSVGLPSNPVEIEIETPEQ
VKKRERREKRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLLAI
GLSIIPTRFTQVSAGQVGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAIYTA
KDDEELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKGKSSSKRLSHSSTSEGQKSSAT
TPKAVAKSCPCKKAKQDEKSSESKENNKEPKKPKTAQTERTQKSKLTKGSQAQKESNNET
SSAEKDVPVRPKNDRRRRVASKVCYKEESGSDEGSASDFELSEEESDVSDEDFETVPKRR
RSSQASQNSKLTTVKRSKTNTSETRQSENLYGAETKPAKSTTPALSEAQRKRNKIISSDE
DEGQQEVRKAMGTDQWLEVFLEPEDKWVCVDCVHGNVGQPQLCFAHATKPLFYVVGFDND
GSVRDVTQRYDPVWMTSTRKSRVDPEWWEETLQPYESPHVERDKKEQNEFQVKLQDQPLP
TAIGEYKNHPLYALKRHLLKYQAIYPETAAILGYCRGEAVYSRDCIHTLHSRDTWLKQAR
VVRIGEVPYKMVKGFSNRARKARLAEPANRDREDLALFGHWQTEEYQPPIAVDGKVPRNE
YGNVYLFLPSMLPVGCVQLKLPNLNRVARKLDIDCAQAITGFDFHGGYSHPVTDGYVVCE
EYKEVLVAAWENEQAEMEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKSEPSAPE
TEKGGGFSSDEEGAPSSESTVGNTAMYWPQNRQLEKQEEIKTKKSKREKRGEAAQLFPFE
KL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaagcgcagagcatcgccccggcccgcagccgccaaaaagaggcgctccggg
aggctgccaaaggaggaggaagaggaggaggaggagaaggatgattttgaagagaaaaag
cccagtataaaaaagacctcaaaacctccagctaggaaaaaggaagaagattgtgaaact
gaagtttccaattcagcaaaaacttccaaaccttcaaaacaagaagaggcaaattcacaa
ataaaagaaagtaaaaagaatgctagaaataaagagaattgtatcaaagaggaaatatgc
agtgactcactgaagcatcctcagaaggagatgaagttaaagacagaatctcctgttaaa
aaagagatggatgaagataatactgacaacgatgatgatgatgatgaaagtgaagatgag
tgggaggatgtggaagaacttcaggaaccctctacagataagttagaagaagctgctgtt
cttccatcagtggggctgccaagcaatcctgtcgagatagagattgaaaccccagagcag
gtgaagaaaagagaaaggagagaaaaaagaaaagccgagtttgagatgtaccttcggaga
atgatgaaacgtttcagcaaggaggttcgtgaggacacacataaggttcacttgctgtgt
ttattagcaaatggtttctacaggaacaggatctgcagccagccagatctcctcgccatc
ggtctgtccatcattcccacgcgcttcacccaagtgtctgcaggccaagtgggccttgtc
tacctttccaacctggtgaaatggtttgttggcaccttcactgtcaatgatgagctctcc
actgaaaaaggagagccccttcagtcaacattggagaggaggtttgccatctacactgca
aaggatgatgaggagcttgttcatatatttttaattattctgcgagctttacagctgctg
tgtcgcctcgtgctgtcttttcagcctattcctctcaaggagacaagaccaaagggaaag
agctcatccaagaggctgtctcacagcagcacctctgagggacagaagagttctgccaca
acacccaaagctgtggcaaaatcatgcccctgcaaaaaagccaagcaggatgagaaatcc
tcagagagcaaagaaaacaacaaggagccaaagaaacctaaaactgcccagactgaaagg
acacaaaagtcaaagctgactaagggtagccaggcacagaaggaatcaaataatgagaca
agttcagcagaaaaagatgtgccagtcaggcccaagaacgaccgccggagacgagtggcc
tccaaagtgtgttacaaggaggagagtggaagtgatgagggcagtgcttcggactttgag
ctttcagaggaggagagtgatgtctctgatgaggattttgaaactgtccctaagaggcgg
agaagctcacaggcttcccagaattcaaagctgacaactgtgaaaaggtcaaaaactaac
acttcagaaacaaggcagtcagaaaatttgtatggagctgagactaagccagcaaaaagt
acaactccagccttgtctgaagcacagaggaagagaaacaaaatcatttctagtgatgag
gatgaaggacagcaggaggtgaggaaagccatgggcacagaccagtggctggaggttttc
cttgagcctgaggacaagtgggtttgtgtagactgtgttcatggcaatgtgggccagccc
cagctgtgctttgcacatgccacaaagccgcttttctacgtcgtgggatttgacaacgat
gggagtgtcagggatgtgacacaaagatatgatccagtgtggatgacctcaacaaggaag
agccgtgtggacccagagtggtgggaagagacactgcagccctatgaaagtccccatgtg
gagagagacaagaaggaacaaaatgagtttcaagtgaagcttcaagatcagcctctacca
acagcaattggagagtacaaaaaccaccctctctatgcactgaagaggcacctcttgaaa
taccaggccatctatcccgagacagctgctatcttggggtactgcaggggagaggctgtc
tactccagagactgcatacacacgctgcactccagggacacttggctgaagcaagctcga
gtggtgaggattggagaagtgccttacaagatggtaaaaggattttccaaccgggcgagg
aaggcgcgcctggcagagccggcgaaccgggaccgggaggacctggcgctgtttggccac
tggcagacagaggagtatcagcctcccatagcagtggatggaaaggttcctcggaatgaa
tatggaaatgtctatctcttcttgccatccatgttacccgtgggctgtgtgcaactgaaa
ctgccaaacctgaacagagtggcacggaagttggacattgactgtgctcaggccatcact
ggatttgattttcatggtggctactcacacccagttactgatggctatgtggtgtgtgag
gagtataaagaagtccttgttgctgcctgggagaatgaacaagcagaaatggagaagaaa
gagaaggagaaacgtgagaaaagagctctagggaattggaagctgctgacaaaaggactt
ctcatcagagagagactgaagcaacgctactccatcaagagtgagccatcagcacctgag
acagagaaaggagggggattctcttctgatgaagaaggagctccaagctcagagagcaca
gtggggaacacagccatgtactggccccagaatcgccagctagagaaacaagaagagata
aaaaccaaaaagagcaagcgagaaaagagaggagaagcggctcagttgttcccttttgag
aaactgtga
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