Serinus canaria (common canary): 103817339
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Entry
103817339 CDS
T05755
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103817339 (EBF1)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103817339 (EBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
103817339
NCBI-ProteinID:
XP_009089744
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLXXXXXXXR
LQLLYSNGIRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCG
NRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDN
MFVHNNSKHGRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDG
LQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEP
TIDYGFQRLQKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEA
LYSVPRNHNQLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGY
VPSTTPQQTNYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSL
PSNCSSSSGIFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPP
M
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagccgccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgaaaagaccaacaacgggatccactaccgcctgnnnnnnnnnnnnnnnnnnnnccgc
ctgcagctgctctacagcaatgggatcaggacggagcaggatttctacgtgcgactcatc
gactccatgaccaagcaggcaatagtatatgaaggccaagacaagaacccagaaatgtgc
cgagttctgctcacgcatgaaataatgtgcagccgctgttgtgacaagaaaagctgtggc
aacagaaatgagactccatcagatccagtgataattgacaggttcttcttgaaatttttc
ctcaaatgtaaccaaaattgcctaaaaaatgcaggaaaccctcgagacatgcgtcgattc
caggtcgtggtgtctacaacagtcaatgtcgatggccatgtgctggcagtgtcagacaat
atgtttgtgcacaacaattccaagcacgggcggagagctcgaagactcgatccctcggaa
ggtacgccttcttatctggaacatgcagctacaccatgtatcaaagccatcagtccaagt
gaaggatggactacaggaggtgccactgtcatcatcataggagacaatttctttgatggg
ttacaggtcatattcggcaccatgctggtttggagtgagctgattactccacatgccatc
cgtgtacagacgcctccccgacacatcccaggggttgtagaagtcacattgtcctacaag
tctaagcagttttgcaagggaacgcctggaagattcatttacacagctctgaacgaaccc
accattgactatggtttccaaaggttacagaaggttatcccccggcaccccggtgacccc
gaacgcttgccaaaggaagtaatacttaagagggctgctgatttagtagaagcactctat
ggtatgccacataataaccaggagataatcctgaagagagctgcagacattgctgaggcg
ctctacagcgtgccccgcaaccacaaccagctccccgccctcgccaacacctccgtccac
gcggggatgatgggggtcaactccttcagcggccagctcgctgtcaatgtctctgaagcc
tcccaagccaccaaccagggtttcactcgcaactccagcagtgtgtcacctcatggctac
gtgccaagcaccaccccgcagcagacaaactacaactctgtcacaacaagcatgaatggc
tatgggaatgctggaatgtcaaatttaggcggttctccaaccttcctgaatggatctgct
gccaattctccctatgccattgtgccatcaagtccgacgatggcctcctccactagcctc
ccctccaactgtagcagctcctctgggattttctccttctcaccagccaacatggtctca
gcggtgaaacagaagagtgcgttcgcgcctgtcgtgagaccccagacctccccccctccc
acctgcaccagcaccaatggcaatagcctgcaagctatatctggcatgattgttcccccc
atgtga
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