Serinus canaria (common canary): 103817437
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Entry
103817437 CDS
T05755
Name
(RefSeq) protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scan04515
]
103817437
Cell adhesion molecules [BR:
scan04515
]
Cadherins
Protocadherins
103817437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
103817437
NCBI-ProteinID:
XP_030085262
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MEPRKSEEPLPGRAMALILVLCVSGMRAETARYSVPEEAERGSFVANIAKDLGLTGEELL
ARKARVVPEGEKQYLQLNQHTGDLVVREQMDREELCGQSEPCLVRFEVLLQSPLQSFRAE
VRLTDINDHAPVFLNKEIVLKISESTVPGTRFLLESAHDPDVGNNSVQHYSISSNEYFLV
YTRRRSDGGRYAELVLDRALDREQQAEVAFSITGVDGGNPPRSGTALIRVVVLDINDNSP
VFARSLYKVSILENSSQDTLVVVVSASDLDSGINGEIVYSIVQNSEENFETFKINPKTGQ
IRLKKPLDYEEKKNYEIDVQATDGGGLSTHCKAEVQVKDVNDNAPEVIITSLTSTVSEAA
LPNTVVALFKVRDRDSGDNGRTTCELTGEQPFRITLLAADAHALVTSETLDREQVEEYNV
TLRARDEGSPALSASKSLLVRLLDVNDNAPTFTQAIYTMVMSENEPAGRSLGRLSATDPD
AGENARVRYSLVPPPTGTLAAASLVSVDAESGTVRILRPLDYEKVRAFEVTVRAADGGSP
PLSAQAVLHIVVRDENDNAPVLLHPAPESSAAAELVPRWAPSGYLVAKVVAVDXAASVAG
HGCPVVRDRGPGRAAARAASGGGCSPSAHRWVVPSAKATPRPAAAAEAAEPGAPQPEQAQ
TSPAQRSSAKLSSA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaggaagagcgaggaaccgctcccggggcgagcgatggctctgatccttgtc
ctctgcgtctcggggatgagagcggaaaccgctcggtactctgtgcccgaagaggcggag
agaggctcttttgtggcgaatatcgctaaggatttgggactaaccggtgaggaattattg
gctcgtaaggctcgagtcgttcctgaaggagaaaagcagtatttacagctgaaccagcac
accggggatttggtggtgagagagcaaatggaccgggaagagctgtgcggacagagcgag
ccctgcctggtgcgttttgaggtgctgctgcagagcccactgcagtccttccgagctgag
gtaagactcaccgacataaacgatcatgctcctgtgttcctaaataaagagattgtttta
aagatttcggagtcgacagtgccggggactcggtttttgttggaaagcgctcacgatcca
gacgtggggaacaatagcgttcagcattatagtatcagctcgaacgagtatttccttgtc
tacacccggcggcggagtgacggcgggaggtacgccgagctggtgttggatcgagccctg
gaccgagagcagcaggcagaagttgctttcagcatcacgggtgtggatggtgggaatcca
ccgcggtctggcacagctttaatccgcgtggtagtcctggatataaatgacaacagcccg
gtatttgctcgaagtctgtataaagtctccatactggaaaatagctcccaggatacctta
gtggtggtagtgtctgctagtgatttagactctggcataaacggagaaatcgtctattct
atagttcaaaattcagaggaaaatttcgagacatttaaaataaacccaaagacaggccag
attcgactcaaaaagcctttggattatgaagaaaaaaagaactacgagatagacgtccaa
gccacagatggagggggcctgtccacgcattgcaaggcggaggtgcaggtgaaggacgtg
aacgataatgcccccgaggtgatcatcacctcgctcaccagcaccgtctccgaagccgcc
cttccgaacaccgtggtggccctcttcaaagtgcgggaccgggactcgggggacaatggc
aggacgacctgcgagttgacgggagagcaacccttcaggatcacgctgctggcagccgac
gcgcacgcgctggtgacctcagagacgctggaccgggagcaggtggaggaatacaacgtg
acgctgcgagctcgagacgagggctcccccgccctctcggcatccaaatccctgctagtg
aggctcttggatgtgaacgacaatgcacccaccttcacccaggccatttacaccatggta
atgagcgaaaacgagcccgcggggaggagcctgggccgcctcagtgccacggatcctgac
gcgggagaaaacgcccgcgtgagatactcgctagtgccgccaccgacgggcaccctcgcc
gccgcatcactcgtttcagtggacgcggagagtggaaccgtccggattttgcgccctctg
gactacgagaaggtgcgcgccttcgaggtgacagtgcgcgcggccgacggcggctccccg
ccgctcagcgcccaggccgtgctgcacatcgtcgtgcgcgacgagaacgacaacgcgccc
gtgctgctgcacccggcccccgagagcagcgcggccgcagagctggtgccgcgctgggca
ccgtccggctacctggtggccaaggtggtggcggtggacgnggccgcgtccgttgctggc
cacgggtgcccggtggttcgggatcgcgggccgggccgagcggcagcgcgggctgcgagc
ggcggcggctgcagtcccagcgcgcaccgctgggtggtgccctcggccaaggcgacgccg
agaccggctgcggcagcggaggcggccgagcccggagcgccacagcccgagcaagctcag
accagcccagcccagcgtagctcagccaagctctcttcagcttag
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